FGSC Announcement Archive- 2005- 2010

 

4/13/10 

Job Title:     Research Computational Biologist (Bioinformatics)

Department:     Department Of Agriculture

Agency:            Agricultural Research Service

Sub Agency:    Bacterial Foodborne Pathogens & Mycology Research

Job Announcement Number: ARS-X10W-0143

Salary Range:

68,809.00 - 106,369.00 USD /year
GS-12: $68,809 to $89,450; GS-13: $81,823 to $106,369

Series & Grade:

GS-0401-12/13

Open Period:

Monday, May 17, 2010 to Friday, July 16, 2010

Position Information:

Full-Time  Permanent

Duty Locations:

1 vacancy - Peoria, IL

Who May Be Considered:

Applications will be accepted from US Citizens, from current and former competitive service Federal employees, and people eligible under special hiring authorities.

 Job Summary:
Find Solutions to Agricultural Problems that Affect Americans Every Day, From Field to Table

Your U.S. citizenship must be verified before entrance on duty.

Seeking a Research Computational Biologist (Bioinformatics) to develop new fungal/mycotoxin detection and control strategies that will enhance food safety and crop production in the U.S. and around the world.

Major Duties:

The incumbent serves as a Research Computational Biologist (Bioinformatics) in the Bacterial Foodborne Pathogens and Mycology Research Unit at the National Center for Agricultural Utilization Research in Peoria, IL.  The research unit conducts fundamental and applied research in genetics, microbiology, chemistry and plant biology to develop new fungal/mycotoxin detection and control strategies that will enhance food safety and crop production in the U.S. and around the world.

Specifically, the incumbent:
*Conducts comparative genomic analyses and develops bioinformatic tools to identify genes and genetic variation critical to pathogen biology using basic programming tools such as SQL, PERL, Python, Linux, and Java.
*Provides genomic information needed to develop strategies to detect Fusarium and reduce mycotoxin contamination in crops.
*Publishes research results in peer reviewed journals and provides supervision to support staff. 

Qualifications:

Your education and experience will be evaluated against all qualification requirements (basic and any additional requirements) listed below.

Basic Requirements:

Applicants must have:
A.    Degree in biological sciences, agriculture, natural resource management, chemistry, or related disciplines appropriate to the position OR
B.    A combination of education and experience - courses equivalent to a major, as shown in A above, plus appropriate experience or additional education.

How To Apply:  Applications may be mailed, faxed, or e-mailed to the appropriate address and/or facsimile number, but they must be received by 11:59 p.m. Eastern Standard Time on the closing date.

Contact Information:

Joanne Kennedy
Phone: 301-504-1580
Fax: 301-504-1535
TDD: 202-855-1234
Email: SCIRECRUIT@ARS.USDA.GOV

Agency Information:
Department Of Agriculture
USDA-REE-ARS-HRD/Announcement #ARS-X10W-0143
5601 Sunnyside Avenue, Stop #5106
Beltsville, MD 20705-5106
E-MAIL:SCIRECRUIT@ARS.USDA.GOV
Fax: 301-504-1535

 

3/1/10

Associate Professor in Below Ground Ecology

The Department of Plant Biology at the University of Georgia invites applications for the Haines Family Professorship in Below Ground Ecology.

This new position will focus on the below ground component of plant ecology: plant roots and their interactions with their environment, other plants and soil organisms (including fungi, bacteria and herbivores), and soil processes (including nutrient and water cycling). We seek an individual who addresses fundamental ecological and evolutionary questions and who integrates field- and lab-based research approaches with molecular tools and techniques. The successful candidate will have a Ph.D. degree and a record of scientific productivity appropriate for appointment at the level of associate professor. S/he is expected to continue and expand a vigorous externally-funded research program and to teach and train undergraduate and graduate students.  The Plant Biology Department encompasses a broad range of disciplines and has historical strengths in plant ecology, evolutionary biology and mycology (http://www.plantbio.uga.edu). We interact with numerous other ecologists, mycologists, and plant scientists across campus in the Odum School of Ecology, Warnell School of Forestry and Natural Resources, Departments of Plant Pathology, Crop and Soil Sciences, Genetics, Biochemistry and Molecular Biology, and on-campus branch of the USFS Southern Research Station. There is also the potential to utilize a wide range of off-campus facilities such as the UGA Marine Institute at Sapelo Island and its associated Sapelo Island Microbial Observatory, the Coweeta Hydrologic Lab and LTER, and the Savannah River Ecology Lab. To apply, the following should be submitted at http://www.plantbio.uga.edu/positions.html : (1) a single PDF file containing a cover letter, curriculum vitae, and short statements of research interests and teaching philosophy; (2) a single PDF file containing three reprints of research papers; (3) four letters of recommendation submitted by references. The search will remain open until the position is filled. Complete applications (including letters) received by March 25, 2010 are assured full consideration. The Franklin College of Arts and Sciences, its many units, and the University of Georgia are committed to increasing the diversity of its faculty and students, and sustaining a work and learning environment that is inclusive.  Women, minorities and people with disabilities are encouraged to apply. The University is an EEO/AA institution.

 

 

11/3/08

MICROBIOLOGY

Special issue on fungal physiology

Call for papers

The field of fungal physiology is about to enter an unprecedented era. New genomics-based tools and resources are generating vast amounts of phenotypic data that reflect the effects of gene deletions on the physiology of the fungal cell. In addition, large-scale systems biology and metabolomic studies are now feasible and will also be yielding immense volumes of data.

To highlight progress towards understanding the inner working of the fungal cell, Microbiology will publish a special issue in November 2009 devoted to fungal physiology. In addition to commissioned reviews, this issue will include original research manuscripts that focus on some aspect of fungal physiology. All manuscripts will be subject to normal peer review. Submissions are invited from mid-March 2009. The deadline for submissions is 1 June 2009.

To register your interest in submitting a manuscript for this special issue, please send an email to the Organizing Editor, Dr Steven Harris (sharri1@unlnotes.unl.edu) or to the Editorial Office (micro@sgm.ac.uk).

For further details about the journal, including Instructions for Authors, visit our website at:

http://mic.sgmjournals.org

 

10/13/08

Ode to an Ectopic Fungal Mutant (Pmk1-61)
By Ormonde Waters (ACNFP)

Thy hyphae fair didst bloom upon my plate
Of medium minimal, yet enough to grow.
And with selective fungicides to ensure
Lest non-transformants would contaminate.
In Stygian darkness, but near-UV also
I nourished you and waited you to spoor.
A picture portrait I did make of you,
Your handsome colours did my eye delight
And I did hope that you might be the one!
An homologous recombinant mutant – Oh so true
On you an Honours chapter I would write
And you a thesis cover would become.
Alas! By PCR you proved ectopic
And now you moulder in a bin necrotic.

Note: During my Honours year I was endeavouring to clone the Stagonospora nodorum orthologue of the Magnaporthe grisea pathogenicity MAP kinase gene Pmk1 (Xu and Hamer, 1996) by degenerate PCR, followed by targeted gene disruption. It was demonstrated that the Mak2 gene was required for pathogenicity in S. nodorum (Solomon et al, 2005). During the screening of the transformants there was a number of in vitro phenotype exhibited. One of these was very pretty but ultimately turned out to be an ectopic insertion and was sent to the autoclave. When an Art in Science competition was announced, it presented an opportunity to redress a possible injustice!

 

7/2/08

We would like to provide an update on the status of Rowland Davis, a scientific leader and beloved member of the Neurospora community. About a month ago Rowland had a serious stroke at his home in Laguna Beach, California. He was in the intensive care unit of a nearby hospital for about two weeks and was then transferred to the acute care facility of Kindred Hospital in Westminster, California. His condition is now stable. It appears that he still has some paralysis and is not yet able to speak. His wife, Margot Norris, has asked those who wish to send messages to do so in the form of cards or letters. These can be sent to 3158 Bern Dr., Laguna Beach, CA 92651. Margot has been taking cards and letters and reading them to Rowland.

 

November, 2006

The FGSC advisory board met in Kansas City and is pleased to announce the establishment of the FGSC Endowment fund at the Genetics Society of America.
 

The FGSC has established an endowment fund to provide a basis for enabling long term support of the FGSC.
An endowment fund is being managed by the Genetics Society of America and is called The FGSC Endowment at the GSA.
Capital may be added to this endowment by the FGSC or by the community.
The initial funds for the endowment came from user-fee proceeds that had been held in reserve at KUMC as FGSC emergency funds.
The endowment money will still be available for this purpose, if necessary, although its long term goal is directed to helping achieve financial sustainability for the FGSC.

 

July, 2006

As part of the Neurospora Functional Genomics Program the FGSC has been preparing KO mutants for distribution. They are available singly or Arrayed in 96- well plates.

We have 8 plates of mutants available within the US as frozen spores in glycerol and to foreign destinations as spores spotted on filter paper disks in 96-well plates.
We are asking $100 per plate plus shipping with a cap of $3000 for people who want the entire set.

The first paper describing the KOs is online now

 

November, 2005

News from the American Association for the Advancement of Science includes the naming of 13 fungal geneticists as fellows. This is a great thing for fungal genetics. The honorees are: Arturo Casadevall,  Aaron Mitchell,  Louise Glass,  Jim Haber,  Phil Hieter,  Nancy Keller,  Tom Petes,  Pat Pukkila,  Eric Selker,  Fred Sherman,  David Soll,  Kevin Struhl,  and Margaret Werner-Washburne.

The FGSC will be passing the 50 year mark in 2010 and it is not too early to begin thinking about collecting materials to document the effort of all the dedicated scientists who have made the FGSC into what is now. Please let us know if you have any photos, essays, recollections

 


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