Neurospora Bibliography

This bibliography represents my attempt to collect all works dealing substantially with Neurospora. Please let me know of anything published in 2005 or 2006 that is not included here or in the previous bibliography, so that it might be mentioned next year. I would be especially happy to hear of chapters from books, and articles from journals not indexed in major bibliographic services. Please also let me know of any errors in citation. Please send reprints or copies of articles to the Fungal Genetics Stock Center.

Craig Wilson, 15236 Ashworth Ave. N., Shoreline WA 98133, USA (

Coauthor index

1. Abe, A., Elegado, E.B., and Sone, T. 2006. Construction of pDESTR, a GATEWAY vector for gene disruption in filamentous fungi. Curr. Microbiol. 52:210-215.

2. Adebolu, T.T. 2005. Survey of the microbial flora of a hospital environment in South-Western Nigeria. J. Food Agric. Environ. 3:11-12.

3. Aderiye, B.I., Laleye, S.A., and Akinduro, H.A. 2006. Spoilage of some stored fermented foods in South West Nigeria. J. Biol. Sci. 6:659-663.

4. Adhvaryu, K.K., Morris, S.A., Strahl, B.D., and Selker, E.U. 2005. Methylation of histone H3 lysine 36 is required for normal development in Neurospora crassa. Eukaryot. Cell 4:1455-1464.

5. Akar, T., Demir, T.A., Kiran, I., Ozcan, A., Ozcan, A.S., and Tunali, S. 2006. Biosorption potential of Neurospora crassa cells for decolorization of Acid Red 57 (AR57) dye. J. Chem. Technol. Biotechnol. 81:1100-1106.

6. Allshire, R., and Selker, E.U. 2007. Fungal models for epigenetic research: Schizosaccharomyces pombe and Neurospora crassa. In Epigenetics. Allis, C.D., Jenuwein, T., Reinberg, D. and Caparros, M.-L. (eds):Cold Spring Harbor Laboratory Press, 502 pg.

7. Arora, D.K. and Berka, R.M. 2005. Genes and genomics. San Diego:Elsevier. 444 pg.

8. Axhemi, A.A. 2005. Isolation and characterization of thymine-7-hydroxylase from Rhodotorula glutinis and iso-orotate decarboxylase from Neurospora crassa. Thesis (M.S.)-- Youngstown State University, pp. 53, 4 leaves.

9. Barker, D., and Pagel, M. 2005. Predicting functional gene links from phylogenetic-statistical analyses of whole genomes. PLoS Comput. Biol. 1:24-31.

10. Bartnicki-Garcia, S. 2006. Chitosomes:past, present and future. FEMS Yeast Res. 6:957-965.

11. Bathe, F. 2005. Influence of neck and hinge regions on the mechanism of conventional kinesins. Thesis (Ph. D.)-- Universitat Witten/Herdecke.

12. Belozerskaya, T.A., and Gessler, N.N. 2006. Oxidative stress and differentiation in Neurospora crassa. Microbiology 75:427-431.

13. Beyenbach, K.W., and Wieczorek, H. 2006. The V-type H+ ATPase:molecular structure and function, physiological roles and regulation. J. Exper. Biol. 209:577-589.

14. Bohn, A., Lopes, J.R., Diambra, L.A., and Menna-Barreto, L.S. 2006. Delay model of circadian gene expression with two negative feedback loops. Biol. Rhythm Res. 37:405-417.

15. Bowman, E.J., and Bowman, B.J. 2005. V-ATPases as drug targets. J. Bioenerg. Biomembr. 37:431-435.

16. Bowman, B.J., McCall, M.E., Baertsch, R., and Bowman, E.J. 2006. A model for the proteolipid ring and bafilomycin/concanamycin-binding site in the vacuolar ATPase of Neurospora crassa. J. Biol. Chem. 281:31885-31893.

17. Bowman, S.M. 2006. Characterization of the Neurospora crassa cell wall and glycosylphosphatidylinositol (GPI)-anchor biosynthetic pathways. Thesis (Ph. D.)--State University of New York at Buffalo, 165 pg.

18. Bowman, S.M., and Free, S.J. 2006. The structure and synthesis of the fungal cell wall. Bioessays 28:799-808.

19. Bowman, S.M., Piwowar, A., Al Dabbous, M., Vierula, J., and Free, S.J. 2006. Mutational analysis of the glycosylphosphatidylinositol (GPI) anchor pathway demonstrates that GPI-anchored proteins are required for cell wall biogenesis and normal hyphal growth in Neurospora crassa. Eukaryot. Cell 5:587-600.

20. Bowring, F.J., Yeadon, P.J., Stainer, R.G., and Catcheside, D.E. 2006. Chromosome pairing and meiotic recombination in Neurospora crassa spo11 mutants. Curr. Genet. 50:115-123.

21. Bratsun, D., Volfson, D., Tsimring, L.S., and Hasty, J. 2005. Delay-induced stochastic oscillations in gene regulation. Proc. Natl. Acad. Sci. USA. 102:14593-14598.

22. Brown, L.S., and Jung, K.H. 2006. Bacteriorhodopsin-like proteins of eubacteria and fungi:the extent of conservation of the haloarchaeal proton-pumping mechanism. Photochem. Photobiol. Sci. 5:538-546.

23. Brunner, M., and Diernfellner, A. 2006. How temperature affects the circadian clock of Neurospora crassa. Chronobiol. Int. 23:81-90.

24. Brunner, M., and Schafmeier, T. 2006. Transcriptional and post-transcriptional regulation of the circadian clock of cyanobacteria and Neurospora. Genes Dev. 20:1061-1074.

25. Buchon, N., and Vaury, C. 2006. RNAi: a defensive RNA-silencing against viruses and transposable elements. Heredity 96:195-202.

26. Burnie, J.P., Carter, T.L., Hodgetts, S.J., and Matthews, R.C. 2006. Fungal heat-shock proteins in human disease. FEMS Microbiol. Rev. 30:53-88.

27. Busoni, L., Dupont, A., Symonds, C., Prost, J., and Cappello, G. 2006. Short time investigation of the Neurospora kinesin step. J. Phys. Condens. Matter 18:S1957-S1966.

28. Cai, J.J., Woo, P.C.Y., Lau, S.K.P., Smith, D.K., and Yuen, K.-y. 2006. Accelerated evolutionary rate may be responsible for the emergence of lineage-specific genes in Ascomycota. J. Mol. Evol. 63:1-11.

29. Cai, L., Jeewon, R., and Hyde, K.D. 2006. Phylogenetic investigations of Sordariaceae based on multiple gene sequences and morphology. Mycol. Res. 110:137-150.

30. Campbell, D.O., Bouchard, P., Desjardins, G., and Legault, P. 2006. NMR structure of Varkud satellite ribozyme stem-loop V in the presence of magnesium ions and localization of metal-binding sites. Biochemistry 45:10591-10605.

31. Casas-Flores, S., Rios-Momberg, M., Rosales-Saavedra, T., Martinez-Hernandez, P., Olmedo-Monfil, V., and Herrera-Estrella, A. 2006. Cross talk between a fungal blue-light perception system and the cyclic AMP signaling pathway. Eukaryot. Cell 5:499-506.

32. Catalanotto, C., Nolan, T., and Cogoni, C. 2006. Homology effects in Neurospora crassa. FEMS Microbiol. Lett. 254:182-189.

33. Cerutti, H., and Casas-Mollano, J.A. 2006. On the origin and functions of RNA-mediated silencing:from protists to man. Curr. Genet. 50:81-99.

34. Ceulemans, H., Beke, L., and Bollen, M. 2006. Approaches to defining the ancestral eukaryotic protein complexome. BioEssays 28:316-324.

35. Chan, N.C., Likic, V.A., Waller, R.F., Mulhern, T.D., and Lithgow, T. 2006. The C-terminal TPR domain of Tom70 defines a family of mitochondrial protein import receptors found only in animals and fungi. J. Mol. Biol. 358:1010-1022.

36. Chavez, C.L. 2005. Analysis of vacuolar ATPase mutants of Neurospora crassa. Thesis (Ph.D.)--University of California, Santa Cruz vii, 94 leaves.

37. Chavez, C., Bowman, E.J., Reidling, J.C., Haw, K.H., and Bowman, B.J. 2006. Analysis of strains with mutations in six genes encoding subunits of the V-ATPase: eukaryotes differ in the composition of the V0 sector of the enzyme. J. Biol. Chem. 281:27052-27062.

38. Cheng, X., Collins, R.E., and Zhang, X. 2005. Structural and sequence motifs of protein (histone) methylation enzymes. Annu. Rev. Biophys. Biomol. Struct. 34:267-294.

39. Chitnis, M.V., and Deshpande, M.V. 2005. Fungal protoplast technology. In: Biodiversity of fungi: their role in human life. Deshmukh;, S.K. and Rai, M.K. (eds). Enfield, N.H. Science Publishers, pp. 439-454.

40. Cho, L.Y. 2006. Control of DNA methylation by a potential histone demethylase ath-2 in Neurospora crassa. Thesis (Honors)--University of Oregon iv, 55 leaves.

41. Collins, L., and Penny, D. 2005. Complex spliceosomal organization ancestral to extant eukaryotes. Mol. Biol. Evol. 22:1053-1066.

42. Colot, H.V., Park, G., Turner, G.E., Ringelberg, C., Crew, C.M., Litvinkova, L., Weiss, R.L., Borkovich, K.A., and Dunlap, J.C. 2006. A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors. Proc. Natl. Acad. Sci. USA 103:10352-10357.

43. Colot, H.V., Park, G., Turner, G.E., Ringelberg, C., Crew, C.M., Litvinkova, L., Weiss, R.L., Borkovich, K.A., and Dunlap, J.C. 2006. Erratum: A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors (Proc. Natl. Acad. Sci. USA. (July 5, 2006) 27, 103 (10352-10357) DOI:10.1073/pnas.0601456103). Proc. Natl. Acad. Sci. USA. 103:16614.

44. Corrochano, L.M. and P. Galland. 2006. Photomorphogenesis and gravitropism in fungi. In: Growth, differentiation and sexuality, 2nd ed. Kues, U. and R. Fischer (eds.). The Mycota: a comprehensive treatise on fungi as experimental systems for basic and applied research. Springer. pp. 233-239

45. Cotado-Sampayo, M., Ojha, M., Ortega-Perez, R., Chappuis, M.L., and Barja, F. 2006. Proteolytic cleavage of a spectrin-related protein by calcium-dependent protease in Neurospora crassa. Curr. Microbiol. 53:311-316.

46. Dean, R., Mitchell, T., Donofrio, N., Jeong, J.S., and Powell, A. 2005. Fungal biology reaps the benefit of genomics. Genome Biol. 6:336-337.331.

47. Debuchy, R. and B.G. Turgeon. 2006. Mating-type structure, evolution, and function in euascomycetes. In: Growth, differentiation and sexuality, 2nd ed. Kues, U. and R. Fischer (eds.). The Mycota: a comprehensive treatise on fungi as experimental systems for basic and applied research. Springer. pp. 293-323

48. De Groot, P.W.J., Ram, A.F., and Klis, F.M. 2005. Features and functions of covalently linked proteins in fungal cell walls. Fungal Genet. Biol. 42:657-675.

49. Dementhon, K., Iyer, G., and Glass, N.L. 2006. VIB-1 is required for expression of genes necessary for programmed cell death in Neurospora. Eukaryot. Cell 5:2161-2173

50. de Paula, R.M., Lewis, Z.A., Greene, A.V., Seo, K.S., Morgan, L.W., Vitalini, M.W., Bennett, L., Gomer, R.H., and Bell-Pedersen, D. 2006. Two circadian timing circuits in Neurospora crassa cells share components and regulate distinct rhythmic processes. J. Biol. Rhythms 21:159-168.

51. Dettman, J.R., Jacobson, D.J., and Taylor, J.W. 2006. Multilocus sequence data reveal extensive phylogenetic species diversity within the Neurospora discreta complex. Mycologia 98:436-446.

52. Dumay, Q.C., Debut, A.J., Mansour, N.M., and Saier, M.H., Jr. 2006. The copper transporter (Ctr) family of Cu+ uptake systems. J. Mol. Microbiol. Biotechnol. 11:10-19.

53. Dunlap, J.C. 2006. Proteins in the Neurospora circadian clockworks. J. Biol. Chem. 281:28489-28493.

54. Dunlap, J.C., and Loros, J.J. 2006. How fungi keep time:circadian system in Neurospora and other fungi. Curr. Opin. Microbiol. 9:579-587.

55. Dykxhoorn, D.M. 2005. RNAi-mediated silencing of viral gene expression and replication. In RNA interference technology: from basic science to drug development. K. Appasani, A. Fire, and M. Nirenberg (eds.). Cambridge University Press. pp. 363-383.

56. Fang, Z., Ouyang, Z., Hu, L., Wang, X., Zheng, H., and Lin, X. 2005. Culturable airborne fungi in outdoor environments in Beijing, China. Sci. Total Environ. 350:47-58.

57. Fedorova, N.D., Badger, J.H., Robson, G.D., Wortman, J.R., and Nierman, W.C. 2005. Comparative analysis of programmed cell death pathways in filamentous fungi. BMC Genomics 6:177.

58. Franchi, L., and Macino, G. 2006. In vitro phosphorylation and kinase assays in Neurospora crassa. In Circadian rhythms : methods and protocols. Rosato, E. (ed). Totowa, NJ. Humana Press. Chap. 32.

59. Freitag, M., and Selker, E.U. 2005. Expression and visualization of red fluorescent protein (RFP) in Neurospora crassa. Fungal Genet. Newslett. 52:14-17.

60. Froehlich, A.C., Noh, B., Vierstra, R.D., Loros, J., and Dunlap, J.C. 2005. Genetic and molecular analysis of phytochromes from the filamentous fungus Neurospora crassa. Eukaryot. Cell 4:2140-2152.

61. Fuchs, J., Demidov, D., Houben, A., and Schubert, I. 2006. Chromosomal histone modification patterns - from conservation to diversity. Trends Plant Sci. 11:199-208.

62. Galagan, J.E., Henn, M.R., Ma, L.J., Cuomo, C.A., and Birren, B. 2005. Genomics of the fungal kingdom:Insights into eukaryotic biology. Genome Res. 15:1620-1631.

63. Galante, D., Hartung de Capriles, C., Mata-Essayag, S., Conesa, A., Cordova, Y., Trejo, E., and Tassinari, P. 2006. Respiratory allergies in Venezuela:are fungi responsible? Mycoses 49:493-498.

64. Gan, X., Arita, K., Isono, S., Kitakawa, M., Yoshino, K., Yonezawa, K., Kato, A., Inoue, H., and Isono, K. 2006. Identification and comparative analysis of the large subunit mitochondrial ribosomal proteins of Neurospora crassa. FEMS Microbiol. Lett. 254:157-164.

65. Gardner, M.J., Hubbard, K.E., Hotta, C., Dodd, A.N., and Webb, A.A.R. 2006. How plants tell the time. Biochem. J. 397:15-24.

66. Gessler, N.N., Leonovich, O.A., Rabinovich, Y.M., Rudchenko, M.N., and Belozerskaya, T.A. 2006. A comparative study of the components of the antioxidant defense system during growth of the mycelium of a wild-type Neurospora crassa strain and mutants, white collar-1 and white collar-2. Appl. Biochem. Microbiol. 42:293-297.

67. Ghoumari, H., Benajiba, M.H., Garcia-Granados, A., Fernandez, A., Martinez, A., Rivas, F., and Arias, J.M. 2006. Biotransformations of ent-18-acetoxy-6-ketomanoyl oxides epimers at C-13 with filamentous fungi. Phytochemistry 67:2294-2302.

68. Gilchrist, M.A., Sulsky, D.L., and Pringle, A. 2006. Identifying fitness and optimal life-history strategies for an asexual filamentous fungus. Evolution 60:970-979.

69. Gladfelter, A.S. 2006. Control of filamentous fungal cell shape by septins and formins. Nat. Rev. Microbiol. 4:223-229

70. Glass, N.L. and A. Fleissner. 2006. Re-wiring the network:understanding the mechanisms and function of anastomosis in filamentous ascomycete fungi. In: Growth, differentiation and sexuality, 2nd ed. Kues, U. and R. Fischer (eds.). The Mycota: a comprehensive treatise on fungi as experimental systems for basic and applied research. Springer. pp. 123-139

71. Goldin, M.M., Volkov, A.G., Goldfarb, Y.S., and Goldin, M.M. 2006. Electrochemical aspects of hemosorption. J. Electrochem. Soc. 153:J91-J99.

72. Gonze, D., and Goldbeter, A. 2006. Circadian rhythms and molecular noise. Chaos 16:026110.

73. Grimaldi, B., Coiro, P., Filetici, P., Berge, E., Dobosy, J.R., Freitag, M., Selker, E.U., and Ballario, P. 2006. The Neurospora crassa White Collar-1 dependent blue light response requires acetylation of histone H3 lysine 14 by NGF-1. Mol. Biol. Cell 17:4576-4583.

74. Groenenboom, M.A.C., Maree, A.F.M., and Hogeweg, P. 2005. The RNA silencing pathway: the bits and pieces that matter. PLoS Comput. Biol. 1:155-165.

75. Haase, A. 2005. Biochemische analyse und charakterisierung der White-Collar-proteinkomplexe: aufklärung des molekularen mechanismus des negativen feedbacks von FRQ auf den WCC in der circadianen uhr von Neurospora crassa. Thesis (Ph. D.)--Universität Heidelberg, 99 pg.

76. Hahlen, K., Ebbing, B., Reinders, J., Mergler, J., Sickmann, A., and Woehlke, G. 2006. Feedback of the kinesin-1 neck-linker position on the catalytic site. J. Biol. Chem. 281:18868-18877.

77. Halaouli, S., Asther, M., Sigoillot, J.C., Hamdi, M., and Lomascolo, A. 2006. Fungal tyrosinases: new prospects in molecular characteristics, bioengineering and biotechnological applications. J. Appl. Microbiol. 100:219-232.

78. Hausner, G., Nummy, K.A., and Bertrand, H. 2006. Asexual transmission, non-suppressiveness and meiotic extinction of small plasmid-like derivatives of the mitochondrial DNA in Neurospora crassa. Fungal Genet. Biol. 43:90-101.

79. Hausner, G., Nummy, K.A., Stoltzner, S., Hubert, S.K., and Bertrand, H. 2006. Biogenesis and replication of small plasmid-like derivatives of the mitochondrial DNA in Neurospora crassa. Fungal Genet. Biol. 43:75-89.

80. He, Q., Cha, J., He, Q., Lee, H.C., Yang, Y., and Liu, Y. 2006. CKI and CKII mediate the FREQUENCY-dependent phosphorylation of the WHITE COLLAR complex to close the Neurospora circadian negative feedback loop. Genes Dev. 20:2552-2565.

81. Henderson, S.T., Eariss, G.A., and Catcheside, D.E.A. 2005. Reliable PCR amplification from Neurospora crassa genomic DNA obtained from conidia. Fungal Genet. Newslett. 52:24.

82. Higgs, H.N., and Peterson, K.J. 2005. Phylogenetic analysis of the formin homology 2 domain. Mol. Biol. Cell 16:1-13.

83. Hizlan, D., Mishima, M., Tittmann, P., Gross, H., Glotzer, M., and Hoenger, A. 2006. Structural analysis of the ZEN-4/CeMKLP1 motor domain and its interaction with microtubules. J. Struct. Biol. 153:73-84.

84. Hoppins, S.C. 2005. Mitochondrial protein import in Neurospora crassa. Thesis (Ph. D.)-- University of Alberta, pp. [19], 228 leaves.

85. Hsiang, T., and Baillie, D.L. 2005. Comparison of the yeast proteome to other fungal genomes to find core fungal genes. J. Mol. Evol. 60:475-483.

86. Huang, G., Wang, L., and Liu, Y. 2006. Molecular mechanism of suppression of circadian rhythms by a critical stimulus. EMBO J. 25:5349-5357.

87. Hur, M.S., and Cho, J.Y. 2006. Sequence-based screening for a putative gamma-butyrobetaine hydroxylase gene from Neurospora crassa. J. Microbiol. Biotechnol. 16:1468-1471.

88. Ichiishi, A., Sotani, S., and Hoshino, M. 2005. Analysis of Saccharomyces cerevisiae RAD23 homolog in Neurospora crassa. Genes Genet. Syst. 80:493.

89. Idnurm, A., and Heitman, J. 2005. Light controls growth and development via a conserved pathway in the fungal kingdom. PLoS Biol. 3:e95.

90. Illmer, P., and Buttinger, R. 2006. Interactions between iron availability, aluminium toxicity and fungal siderophores. Biometals 19:367-377.

91. Irmler, S., Rogniaux, H., Hess, D., and Pillonel, C. 2006. Induction of OS-2 phosphorylation in Neurospora crassa by treatment with phenylpyrrole fungicides and osmotic stress. Pestic. Biochem. Physiol.84:25-37.

92. Ishibashi, K., Suzuki, K., Ando, Y., Takakura, C., and Inoue, H. 2006. Nonhomologous chromosomal integration of foreign DNA is completely dependent on MUS-53 (human Lig4 homolog) in Neurospora. Proc. Natl. Acad. Sci. USA 103:14871-14876.

93. Jacobson, D.J., Dettman, J.R., Adams, R.I., Boesl, C., Sultana, S., Roenneberg, T., Merrow, M., Duarte, M., Marques, I., Ushakova, A., Carneiro, P., Videira, A., Navarro-Sampedro, L., Olmedo, M., Corrochano, L.M., and Taylor, J.W. 2006. New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales. Mycologia 98:550-559.

94. Jaud, J., Bathe, F., Schliwa, M., Rief, M., and Woehlke, G. 2006. Flexibility of the neck domain enhances Kinesin-1 motility under load. Biophys. J. 91:1407-1412.

95. Jensen, R.E. 2005. Control of mitochondrial shape. Curr. Opin. Cell Biol.17:384-388.

96. Jolma, I.W., Falkeid, G., Bamerni, M., and Ruoff, P. 2006. Lithium leads to an increased FRQ protein stability and to a partial loss of temperature compensation in the Neurospora circadian clock. J. Biol. Rhythms 21:327-334.

97. Jumpponen, A., and Johnson, L.C. 2005. Can rDNA analyses of diverse fungal communities in soil and roots detect effects of environmental manipulations - a case study from tallgrass prairie. Mycologia 97:1177-1194.

98. Jun, Y.H., Ji, Y.M., Su, K.L., Hyoun, S.K., Do, J.K., Kyoung, H.K., Hyung, H.L., Hye, K.K., Yoon, H.J., and Se, W.S. 2006. Crystal structure of 2-nitropropane dioxygenase complexed with FMN and substrate:Identification of the catalytic base. J. Biol. Chem. 281:18660-18667.

99. Kalavrizioti, D., Vourekas, A., Stamatopoulou, V., Toumpeki, C., Giannouli, S., Stathopoulos, C., and Drainas, D. 2006. RNA-Mediated therapeutics: from gene inactivation to clinical application. Curr. Top. Med. Chem. 6:1737-1758.

100. Kaldi, K., Gonzalez, B.H., and Brunner, M. 2006. Transcriptional regulation of the Neurospora circadian clock gene wc-1 affects the phase of circadian output. EMBO Rep. 7:199-204.

101. Kaneko, I., Dementhon, K., Xiang, Q., and Glass, N.L. 2006. Nonallelic interactions between het-c and a polymorphic locus, pin-c, are essential for nonself recognition and programmed cell death in Neurospora crassa. Genetics 172:1545-1555.

102. Karpinets, T.V., Greenwood, D.J., Sams, C.E., and Ammons, J.T. 2006. RNA:protein ratio of the unicellular organism as a characteristic of phosphorous and nitrogen stoichiometry and of the cellular requirement of ribosomes for protein synthesis. BMC Biol. 4:30.

103. Kasbekar, D.P. 2006. Magic with moulds: meiotic and mitotic crossing over in Neurospora inversions and duplications. J. Biosci. 31:3-4.

104. Kato, A., and Inoue, H. 2006. Growth defect and mutator phenotypes of RecQ-deficient Neurospora crassa mutants separately result from homologous recombination and nonhomologous end joining during repair of DNA double-strand breaks. Genetics 172:113-125.

105. Kelly, W.G. 2006. Standing guard: perinuclear localization of an RNA-dependent RNA polymerase. Proc. Natl. Acad. Sci. USA 103:2007-2008.

106. Kerenyi, Z., Olah, B., Jeney, A., Hornok, L., and Leslie, J.F. 2006. The homologue of het-c of Neurospora crassa lacks vegetative compatibility function in Fusarium proliferatum. Appl. Environ. Microbiol. 72:6527-6532.

107. Kim, H., and Borkovich, K.A. 2006. Pheromones are essential for male fertility and sufficient to direct chemotropic polarized growth of trichogynes during mating in Neurospora crassa. Eukaryot. Cell 5:544-554.

108. Kiranmayi, P., and Mohan, P.M. 2006. Metal transportome of Neurospora crassa. In Silico Biol. 6:0016.

109. Kirchberger, T., Wagner, G., Xu, J., Cordiglieri, C., Wang, P., Gasser, A., Fliegert, R., Bruhn, S., Fluegel, A., Lund, F.E., Zhang, L.h., Potter, B.V.L., and Guse, A.H. 2006. Cellular effects and metabolic stability of N1-cyclic inosine diphosphoribose and its derivatives. Br. J. Pharmacol.149:337-344.

110. Kivioja, T., Arvas, M., Saloheimo, M., Penttila, M., and Ukkonen, E. 2005. Optimization of cDNA-AFLP experiments using genomic sequence data. Bioinformatics 21:2573-2579.

111. Kleckner, N. 2006. Chiasma formation:chromatin/axis interplay and the role(s) of the synaptonemal complex. Chromosoma 115:175-194.

112. Klenov, M.S., and Gvozdev, V.A. 2005. Heterochromatin formation: role of short RNAs and DNA methylation. Biochemistry-Moscow 70:1187-1198.

113. Komarov, A.G., Deng, D.F., Craigen, W.J., and Colombini, M. 2005. New insights into the mechanism of permeation through large channels. Biophys. J. 89:3950-3959.

114. Kramer, C. 2006. Rhythmic conidiation in Neurospora crassa. In Circadian rhythms: methods and protocols. Rosato, E. (ed). Totowa, NJ. Humana Press. Chap. 3.

115. Kramer, C. 2006. Isolation of total RNA from Neurospora mycelium. In Circadian rhythms: methods and protocols. Rosato, E. (ed). Totowa, NJ. Humana Press. Chap. 19.

116. Kramer, C. 2006. Northern analysis of sense and antisense frequency RNA in Neurospora crassa. In Circadian rhythms: methods and protocols. Rosato, E. (ed). Totowa, NJ. Humana Press. Chap. 23.

117. Krantz, M., Becit, E., and Hohmann, S. 2006. Comparative genomics of the HOG-signalling system in fungi. Curr. Genet. 49:137-151.

118. Krystofova, S., and Borkovich, K.A. 2006. The predicted G-protein-coupled receptor GPR-1 is required for female sexual development in the multicellular fungus Neurospora crassa. Eukaryot. Cell 5:1503-1516.

119. Kues, U. and R. Fischer (eds.). 2006. Growth, differentiation and sexuality, 2nd ed. The Mycota: a comprehensive treatise on fungi as experimental systems for basic and applied research. Springer. 470 pg.

120. Kumar, K.S., Ravi Kumar, B., Siddavattam, D., and Subramanyam, C. 2006. Characterization of calcineurin-dependent response element binding protein and its involvement in copper-metallothionein gene expression in Neurospora. Biochem. Biophys. Res. Commun. 345:1010-1013.

121. Kurosawa, G., and Goldbeter, A. 2006. Amplitude of circadian oscillations entrained by 24-h light-dark cycles. J. Theor. Biol. 242:478-488.

122. Kwan, A.H., Winefield, R.D., Sunde, M., Matthews, J.M., Haverkamp, R.G., Templeton, M.D., and Mackay, J.P. 2006. Structural basis for rodlet assembly in fungal hydrophobins. Proc. Natl. Acad. Sci. USA 103:3621-3626.

123. Lakin-Thomas, P.L. 2006. New models for circadian systems in microorganisms. FEMS Microbiol. Lett. 259:1-6.

124. Lakin-Thomas, P.L. 2006. Transcriptional feedback oscillators:maybe, maybe not. J. Biol. Rhythms 21:83-92.

125. Lakin-Thomas, P.L. 2006. Circadian clock genes frequency and white collar-1 are not essential for entrainment to temperature cycles in Neurospora crassa. Proc. Natl. Acad. Sci. USA 103:4469-4474.

126. Latha, J.N., Rashmi, K., and Mohan, P.M. 2005. Cell-wall-bound metal ions are not taken up in Neurospora crassa. Can. J. Microbiol. 51:1021-1026.

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