Aspergillus Bibliography


This bibliography attempts to cover genetical and biochemical publications on Aspergillus nidulans and also includes selected references to related species and topics.  Entries have been checked as far as possible, but please tell me of any errors and omissions.  Authors are kindly requested to send a copy of each article to the FGSC for its reprint collection.


John Clutterbuck. Institute of Biomedical and Life Sciences, Anderson College, University of Glasgow, Glasgow G11 6NU, Scotland, UK.  Email:




Keyword Index

Author Index




1. Bachewich, C., Masker, K. & Osmani, S. 2005 The polo-like kinase PLKA is required for initiation and progression through mitosis in the filamentous fungus Aspergillus nidulans. Mol. Microbiol. 55:572-587

2. Balajee, S.A., Gribskov, J.L., Hanley, E., Nickle, D. & Marr, K.A. 2005 Aspergillus lentulus sp.nov., a new sibling species of A. fumigatus. Eukaryot. Cell 4:625-232

3. Basten, D.E.J.W., Moers, A.P.H.A., van Ooyen, A.J.J. & Schaap, P.J. 2005 Characterisation of Aspergillus niger prolyl aminopeptidase. Mol. Genet. Genomics 272:673-679

4. Becker, T.C.A. & de Castro-Prado, M.A.A. 2004 Parameiosis in Aspergillus nidulans in response to doxorubicin. Folia Microbiol. 49:699-704

5. BenCina, M., LegiSa, M. & Read, N.D. 2005 Cross-talk between cAMP and calcium signalling in Aspergillus niger. Mol. Microbiol. 56:268-281

6. Bignell, E., Negrete-Urtasun, S., Calcagno, A.M., Arst, H.N.Jr., Rogers, T. & Haynes, K. 2005 Virulence comparisons of Aspergillus nidulans mutants are confounded by the inflammatory response of p47phox-/- mice. Infect. Immun. 73:5204-5207

7. Bignell, E., Negrete-Urtasun, S., Calcagno, A.M., Haynes, K., Arst, H.N.Jr. & Rogers, T. 2005 The Aspergillus pH-responsive transcription factor PacC regulates virulence. Mol. Microbiol. 55:1072-1084

8. Boyce, K.J., Hynes, M.J. & Andrianopoulos, A. 2005 The Ras and Rho GTPases genetically interact to co-ordinately regulate cell polarity during development in Penicillium marneffei. Mol. Microbiol. 55:1487-1501

9. Brakhage, A.A., Spröte, P., Al-Abdallah, Q., Gehrke, A., Plattner, H. & Tüncher, A. 2004 Regulation of penicillin biosynthesis in filamentous fungi. Adv. Biochem. Eng.-Biotechnol. 88:45-90

10. Brito-Madurro, A.G., Cuadros-Orellana, S., Martinez-Rossi, N.M. & Rossi, A. 2005 Undecanoic acid resistance in filamentous fungi: identification and linkage mapping of the Aspergillus nidulans udaA gene. J. Gen. Appl. Microbiol. 51:47-49

11. Brock, M. & Buckel, W. 2004 On the mechanism of action of the antifungal agent propionate. Eur. J. Biochem. 271:3227-3241

12. Bruggeman, J., Debets, A.J.M., Swart, K. & Hoekstra, R.F. 2003 Male and female roles in crosses of Aspergillus nidulans as revealed by vegetatively incompatible parents. Fungal Genet. Biol. 39:136-141

13. Burns, C., Geraghty, R., Neville, C., Murphy, A., Kavanagh, K. & Doyle, S. 2005 Identification, cloning, and functional expression of three glutathione transferase genes from Aspergillus fumigatus. Fungal Genet. Biol. 42:319-327

14. Cánovas, D., Vooijs, R., Schat, H. & de Lorenzo, V. 2004 The role of thiol species in the hypertolerance of Aspergillus sp. P37 to arsenic. J. Biol. Chem. 279:51234-51240

15. Chang, P.-K., Yu, J. & Yu, J.-H. 2004 aflT, a MFS transporter-encoding gene located in the aflatoxin gene cluster, does not have a significant role in aflatoxin secretion. Fungal Genet. Biol. 41:911-920

16. Chant, A., Kraemer-Pecore, C.M., Watkin, R. & Kneale, G.G. 2005 Attachment of a histidine tag to the minimal zinc finger protein of the Aspergillus nidulans gene regulatory protein AreA causes a conformational change at the DNA-binding site. Prot. Express. Purif.  39:152-159

17. Choi, C.-J., Ju, H.-J., Park, B.-H., Qin, R., Jahng, K.-Y., Han, D.-M. & Chae, K.-S. 2005 Isolation and characterization of the Aspergillus nidulans eglC gene encoding a putative b-1,3-endoglucanase. Fungal Genet. Biol. 42:590-600

18. Cultrone, A., Scazzocchio, C., Rochet, M., Montero-Morán, G., Drevet, C. & Fernández-Martin, R. 2005 Convergent evolution of hydroxylation mechanisms in the fungal kingdom: molybdenum-independent hydroxylation of xanthine via a-ketoglutarate-dependent dioxygenases. Mol. Microbiol. 57:276-290

19. Damveld, R.A., Arentshorst, M., Franken, A., vanKuyk, P.A., Klis, F.M., van den Hondel, C.A.M.J.J. & Ram, A.F.J. 2005 The Aspergillus niger MADS-box transcription factor RimA is required for cell wall reinforcement in response to cell wall stress. Mol. Microbiol. 58:305-319

20. Damveld, R.A., Arentshorst, M., vanKuyk, P.A., Klis, F.M., van den Hondel, C.A.M.J.J. & Ram, A.F.J. 2005 Characterisation of CwpA, a putative glycosylphosphatidylinositol-anchored cell wall mannoprotein in the filamentous fungus Aspergillus niger. Fungal Genet. Biol. 42:873-885

21. Damveld, R.A., vanKuyk, P.A., Arentshorst, M., Klis, F.M., van den Hondel, C.A.M.J.J. & Ram, A.F.J. 2005 Expression of agsA, one of five 1,3-a-D-glucan synthase-encoding genes in Aspergillus niger, is induced in response to cell wall stress. Fungal Genet. Biol. 42:165-177

22. David, A., Krogh, A.M., Roca, C., Ĺkesson, M. & Nielsen, J. 2005 CreA influences the metabolic fluxes of Aspergillus nidulans growth on glucose and xylose. Microbiol. 151:2209-2221

23. Davies, J.R., Osmani, A.H., De Souza, C.P.C., Bachewich, C. & Osmani, S.A. 2004 Potential link between the NIMA mitotic kinase and nuclear membrane fission during mitotic exit in Aspergillus nidulans. Eukaryot. Cell 3:1433-1444

24. Davis, M.A., Askin, M.C. & Hynes, M.J. 2005 Amino acid catabolism by an areA-regulated gene encoding an L-amino acid oxidase with broad substrate specificity in Aspergillus nidulans. Appl. Env. Microbiol. 71:3551-3555

25. de Aguirre, L., Hurst, S.F., Choi, J.S., Shin, J.H., Hinrikson, H.P. & Morrison, C.J. 2004 Rapid differentiation of Aspergillus species from other medically important opportunistic molds and yeasts by PCR-enzyme immunoassay. J. Clin. Microbiol. 42:3495-3504

26. De Groot, P.W.J., Ram, A.F. & Klis, F.M. 2005 Features and functions of covalently linked proteins in fungal cell walls. Fungal Genet. Biol. 42:657-675

27. De Souza, C.P.C., Osmani, A.H., Hashmi, S.B. & Osmani, S.A. 2004 Partial nuclear pore complex disassembly during closed mitosis in Aspergillus nidulans. Curr. Biol. 14:1973-1984

28. Díaz, M., Adham, S.A.I., Ramón, D., Gil, J.A. & Santamaría, R.I. 2004 Streptomyces lividans and Brevibacterium lactofermentum as heterologous hosts for the production of X22 xylanase from Aspergillus nidulans. Appl. Microbiol. Biotechnol. 65:401-406

29. Downing, M.E., Brady, K.L. & Caprara, M.G. 2005 A C-terminal fragment of an intron-encoded maturase is sufficient for promoting group I intron splicing. RNA 11:437-446

30. Durán, A. & Nombela, C. 2004 Fungal cell wall biogenesis: building a dynamic interface with the environment. Microbiology 150:3099-3103

31. Emri, T., Molnár, Z., Pusztahelyi, T. & Pócsi, I. 2004 Physiological and morphological changes in autolyzing Aspergillus nidulans cultures. Folia Microbiol. 49:277-284

32. Emri, T., Molnár, Z., Pusztahelyi, T., Rosén, S. & Pócsi, I. 2004 Effect of vitamin E on autolysis and sporulation of Aspergillus nidulans. Appl. Biochem. Biotechnol. 118:337-348

33. Emri, T., Molnár, Z., Pusztahelyi, T., Varecza, Z. & Pócsi, I. 2005 The FluG-BrlA pathway contributes to the initialisation of autolysis in submerged Aspergillus nidulans cultures. Mycol. Res. 109:757-763

34. Fagundes, M.R.Z.K., Lima, J.F., Savoldi, M., Malavazi, I., Larson, R.E., Goldman, M.H.S. & Goldman, G.H. 2004 The Aspergillus nidulans npkA gene encodes a Cdc2-related kinase that genetically interacts with the UvsBATR kinase. Genetics 167: 1627-1641

35. Fagundes, M.R.Z.K., Semighini, C.P., Malavazi, I., Savoldi, M., Lima, J.F., Goldman, M.H.S., Harris, S.D. & Goldman, G.H. 2005 Aspergillus nidulans uvsBATR and scaANBS1 genes show genetic interactions during recovery from replication stress and DNA damage. Eukaryot. Cell 4:1239-1252

36. Felenbok, B., Flipphi, M. & Nikolaev, I. 2001 Ethanol catabolism in Aspergillus nidulans: a model system for studying gene regulation. Prog. Nucleic Acid Res. Mol. Biol. 69:149-204

37. Firbank, S.J., Rogers, M., Hurtado-Guerrero, R., Dooley, D.M., Halcrow, M.A., Phillips, S.E.V., Knowles, P.F. & McPherson, M.J. 2004 Cofactor processing in galactose oxidase. Biochem. Soc. Trans. 31:506-509 or Biochem. Soc. Symp. 71:15-25

38. Furukawa, K., Hoshi, Y., Maeda, T., Nakajima, T. & Abe, K. 2005 Aspergillus nidulans HOG pathway is activated only by two-component signalling pathway in response to osmotic stress. Mol. Microbiol. 56:1246-1261

39. Gaind, S., Pandey, A.K. & Lata 2005 Biodegradation study of crop residues as affected by exogenous inorganic nitrogen and fungal inoculants. J. Basic Microbiol. 45:301-311

40. García, I., Gonzalez, R., Gómez, D. & Scazzocchio, C. 2004 Chromatin rearrangements in the prnD-prnB bidirectional promoter: dependence on transcription factors. Eukaryot. Cell 3:144-156

41. Gardiner, D.M. & Howlett, B.J. 2004 Negative selection using thymidine kinase increases the efficiency of recovery of transformants with targeted genes in the filamentous fungus Leptosphaeria maculans. Curr. Genet. 45:249-255

42. Graminha, M.A.S., Rocha, E.M.F., Prade, R.A. & Martinez-Rossi, N.M. 2004 Terbinafine resistance mediated by salicylate 1-monooxygenase in Aspergillus nidulans. Antimicrob. Agents Chemother. 48:3530-3535

43. Grundmann, A. & Li, S.-M. 2005 Overproduction, purification and characterization of FtmPT1, a brevianamide F prenyltransferase from Aspergillus fumigatus. Microbiol. 151:2199-2207

44. Gygax, S.E., Semighini, C.P., Goldman, G.H. & Harris, S.D. 2005 SepBCTF4 is required for the formation of DNA-damage-induced UvsCRAD51 foci in Aspergillus nidulans. Genetics 169:1391-1402

45. Hammond, T.M. & Keller, N.P. 2005 RNA silencing in Aspergillus nidulans is independent of RNA-dependent RNA polymerases. Genetics. 169:607-617

46. Han, Y.-K., Lee, T., Han, K.H., Yun, S.-H. & Lee, Y.-W. 2004 Functional analysis of the homoserine O-acetyltransferase gene and its identification as a selectable marker in Gibberella zeae. Curr. Genet. 46:205-212

47. Harris, S.D., Read, N.D., Roberson, R.W., Shaw, B., Seiler, S., Plamann, M. & Momany, M. 2005 Polarisome meets spitzenkörper: microscopy, genetics and genomics converge. Eukaryot. Cell 4:225-229

48. Horio, T. & Oakley, B.R. 2005 The role of microtubules in rapid hyphal tip growth of Aspergillus nidulans. Mol. Biol. Cell 16:918-926

49. Hu, G. & St. Leger. R.J. 2004 A phylogenomic approach to reconstructing the diversification of serine proteases in fungi. J. Evol. Biol. 17:1204-1214

50. Ichinomiya, M., Yamada, E., Yamashita, S., Ohta, A. & Horiuchi, H. 2005 Class I and class II chitin synthases are involved in septum formation in the filamentous fungus Aspergillus nidulans Eukaryot. Cell 4:1125-1136

51. Ilyés, H., Fekete, E., Karaffa, L., Fekete, É., Sándor, E., Szentirmai, A. & Kubicek, C.P. 2004 CreA-mediated carbon catabolite repression of b-galactosidase formation in Aspergillus nidulans is growth rate dependent. FEMS Microbiol. Lett. 235:147-151

52. Ishi, K., Maruyama, J., Juvvadi, P.R., Nakajima, H. & Kitamoto, K. 2005 Visualizing nuclear migration during conidiophore development in Aspergillus nidulans and Aspergillus oryzae: multinucleation of conidia occurs through direct migration of plural nuclei from phialides and confers greater viability and early germination in Aspergillus oryzae. Biosci, Biotechnol. Biochem. 69:747-754

53. Jalving, R., Godefrooij, J., ter Veen, W.J., van Ooyen, A.J.J. & Schaap, P.J. 2005 Characterisation of the Aspergillus niger dapB gene, which encodes a novel fungal type IV dipeptidyl aminopeptidase. Mol. Genet Genomics 273:319-325

54. Kanamasa, S., Yamaoka, K., Kawaguchi, T., Sumitani, J. & Arai, M. 2003 Transformation of Aspergillus aculeatus using the drug resistance gene of Aspergillus oryzae and the pyrG gene of Aspergillus nidulans. Biosci. Biotechnol. Biochem. 67:2661-2663

55. Karaoglu, H., Lee, C.M.Y. & Meyer, W. 2005 Survey of simple sequence repeats in completed fungal genomes. Mol. Biol. Evol.  22:639-649 [Erratum 22:1159.]

56. Kawagishi, M., Akashi, T. & Kikuchi, A. 2005 Dynamic association of topoisomerase II to the mitotic chromosomes in live cells of Aspergillus nidulans. Biochem. Biophys. Res. Commun. 334:324-332

57. Kinghorn, J.R., Sloan, J., Kana’n, G.J.M., DaSilva, E.R., Rouch, D.A. & Unkles, S.E. 2005 Missense mutations that inactivate the Aspergillus nidulans nrtA gene encoding a high-affinity nitrate transporter. Genetics 169:1369-1377

58. Konzack, S., Rischitor, P.E., Enke, C. & Fischer, R. 2004 The role of the kinesin motor KipA in microtubule organization and polarized growth of Aspergillus nidulans. Mol. Biol. Cell 16:497-506

59. Koukaki, M., Vlanti, A., Goudela, S., Pantazopoulou, A., Gioule, H., Tournaviti, S. & Diallinas, G. 2005 The nucleobase-ascorbate transporter (NAT) signature motif in UapA defines the function of the purine translocation pathway. J. Mol. Biol. 350:499-513

60. Krappmann, S., Bayram, Ö. & Braus, G.H. 2005 Deletion and allelic exchange of the Aspergillus fumigatus veA locus via a novel recyclable marker module. Eukaryot. Cell 4:1298-1307

61. Kupfer, D.M., Drabenstot, S.D., Buchanan, K.L., Lai, H., Zhu, H., Dyer, D.W., Roe, B.A. & Murphy, J.W. 2004 Introns and splicing elements of five diverse fungi. Eukaryot. Cell 3:1088-1100

62. Lamb, H.K., Ren, J., Park, A., Johnson, C., Leslie, K., Cocklin, S., Thompson, P., Mee, C., Cooper, A., Stammers, D.K. & Hawkins, A.R. 2004 Modulation of the ligand binding properties of the transcription repressor NmrA by GATA-containing DNA and site-directed mutagenesis. Protein Sci. 13:3127-3138

63. Le Sann, C., Gower, M.A. & Abell, A.D. 2004 Inhibitors of types I and II dehydroquinase. Mini-Rev. Med. Chem. 4:747-756

64. Lee, J.I., Yu, Y.M., Rho, Y.M., Park, B.C., Choi, J.H., Park, H.-M. & Maeng, P.J. 2005 Differential expression of the chsE gene encoding a chitin synthase of Aspergillus nidulans in response to developmental status and growth conditions. FEMS Microbiol. Lett. 249:121-129

65. Leiter, E., Szappanos, H., Oberparleiter, C., Kaiserer, L., Csernoch, L., Pusztahelyi, T., Emri, T., Pócsi, I., Salvenmoser, W. & Marx, F. 2005 Antifungal protein PAF severely affects the integrity of the plasma membrane of Aspergillus nidulans and induces an apoptosis-like phenotype. Antimicrob. Agents Chemother. 49:2445-2453

66. Lim, S., Notley-McRobb, M., Lim, M. & Carter, D.A. 2004 A comparison of the nature and abundance of microsatellites in 14 fungal genomes. Fungal Genet. Biol. 41:1025-1036

67. Lin, X. & Momany, M. 2004 Identification and complementation of abnormal hyphal branch mutants ahbA1 and ahbB1 in Aspergillus nidulans. Fungal Genet. Biol. 41:998-1006

68. Liu, X.-Q. & Yang, J. 2004 Prp8 intein in fungal pathogens: target for potential antifungal drugs. FEBS Lett. 572:46-50

69. Lu, P., Zhang, A., Dennis, L.M., Dahl-Roshak, A.M., Xia, Y.-Q., Arison, B., An, Z. & Tkacz, J.S. 2005 A gene (pks2) encoding a putative 6-methylsalicylic acid synthase from Glarea lozoyensis. Mol. Genet. Genomics 273:207-216

70. Luque, R., Orejas, M., Perotti, N.I., Ramón, D. & Lucca, M.E. 2004 pH control of the production of recombinant glucose oxidase in Aspergillus nidulans. J. Appl. Microbiol.  97:332-337

71. Maerker, C., Rohde, M., Brakhage, A.A. & Brock, M. 2005 Methylcitrate synthase from Aspergillus fumigatus. Propionyl-CoA affects polyketide synthesis, growth and morphology of conidia. FEBS J. 272:3615-3630

72. Maggio-Hall, L.A. & Keller, N.P. 2004 Mitochondrial b-oxidation in Aspergillus nidulans. Mol. Microbiol. 54:1173-1185

73. Maheshwari, R. 2005 Nuclear behaviour in fungal hyphae. FEMS Microbiol. Lett. 49:7-14

74. Malavazi, I., Lima, J.F., Fagundes, M.R.Z.K., Efimov, V.P., Goldman, M.H.S. & Goldman, G.H. 2005 The Aspergillus nidulans sldIRAD50 gene interacts with bimEAPC1, a homologue of an anaphase-promoting complex subunit. Mol. Microbiol. 57:222-237

75. Marx, F., Salvenmoser, W., Kaiserer, L., Graessle, S., Weiler-Görz, R., Zadra, I. & Oberparleiter, C. 2005 Proper folding of the antifungal protein PAF is required for optimal activity. Res. Microbiol. 156:35-46

76. Mathieu, M., Nikolaev, I., Scazzocchio, C. & Felenbok, B. 2005 Patterns of nucleosomal organization in the alc regulon of Aspergillus nidulans: roles of the AlcR transcriptional activator and the CreA global repressor. Mol. Microbiol. 56:535-548

77. Michielse, C.B., Arentshorst, M., Ram, A.F.J. & van den Hondel, C.A.M.J.J. 2005 Agrobacterium-mediated transformation leads to improved gene replacement efficiency in Aspergillus awamori. Fungal Genet. Biol. 42:9-19

78. Mohammedi, I., Eckert, A., Thiebaut, A., Piens, M.A., Malhičre, S. & Robert, D. 2005 Pneumopathie fatale ŕ Aspergillus nidulans. Revue Med. Interne 26:249-250

79. Molnár, Z., Mészáros, E., Szilágyi, Z., Rosén, S., Emri, T. & Pócsi, I. 2004 Influence of fadAG203R and DflbA mutations on morphology and physiology of submerged Aspergillus nidulans cultures. Appl. Biochem. Biotechnol. 118:349-360

80. Momany, M., Lindsey, R., Hill, T.W., Richardson, E.A., Momany, C., Pedreira, M., Guest, G.M., Fisher, J.F., Hessler, R.B. & Roberts, K.A. 2004 The Aspergillus fumigatus cell wall is organized in domains that are remodelled during polarity establishment. Microbiol. 150:3261-3268

81. Monroy, F. & Sheppard, D.C. 2005 Taf1: a class II transposon of Aspergillus fumigatus. Fungal Genet. Biol. 42:638-645

82. Morelle, W., Bernard, M., Depeaupuis, J.-P., Buitrago, M., Tabouret, M. & Latgé, J.-P. 2005 Galactomannoproteins of Aspergillus fumigatus. Eukaryot. Cell 4:1308-1316

83. Muro-Pastor, M.I., Strauss, J., Ramón, A. & Scazzocchio, C. 2004 A paradoxical mutant GATA factor. Eukaryot. Cell 3:393-405

84. Muthuvijayan, V. & Marten, M.R. 2004 In silico reconstruction of nutrient-sensing signal transduction pathways in Aspergillus nidulans. In Silico Biol. 4:605-631

85. Mouyna, I., Morelle, W., Vai, M., Monod, M., Léchenne, B., Fontaine, T., Beauvais, A., Sarfati, J., Prévost, M.-C., Henry, C. & Latgé, J.-P. 2005 Deletion of GEL2 encoding for a b(1-3)glucanosyltransferase affects morphogenesis and virulence in Aspergillus fumigatus. Mol. Microbiol. 56:1675-1688

86. Natsume, T., Egusa, M., Kodama, M., Johnson, R., Itoh, T. & Itoh, Y. 2004 An appropriate increase in the transcription of Aspergillus nidulans uvsC improved gene targeting efficiency. Biosci. Biotechnol. Biochem. 68:1649-1656

87. Ni, M., Rierson, S., Seo, J.-A. & Yu, J.-H. 2005 The pkaB gene encoding the secondary protein kinase A catalytic subunit has a synthetic lethal interaction with pkaA and plays overlapping and opposite roles in Aspergillus nidulans. Eukaryot. Cell 4:1465-1476

88. Nichols, C.E., Hawkins, A.R. & Stammers, D.K. 2004 Structure of the 'open' form of Aspergillus nidulans 3-dehydroquinate synthase at 1.7 Ĺ resolution from crystals grown following enzyme turnover. Acta Cryst. D60:971-973

89. Nichols, C.E., Ren, J., Leslie, K., Dhaliwal, B., Lockyer, M., Charles, I., Hawkins, A.R. & Stammers, D.K. 2004 Comparison of ligand-induced conformational changes and domain closure mechanisms, between prokaryotic and eukaryotic dehydroquinate synthases. J. Mol. Biol. 343:533-546

90. Noor, S. & Punekar, N.S. 2005 Allosteric NADP-glutamate dehydrogenase from aspergilli: purification, characterization and implications for metabolic regulation at the carbon-nitrogen interface. Microbiol. 151:1409-1419

91. Ohara, T. & Tsuge, T. 2004 FoSTUA, encoding a basic helix-loop-helix protein, differentially regulates development of three kinds of asexual spores, macroconidia, microconidia, and chlamydospores, in the fungal plant pathogen Fusarium oxysporum. Eukaryot. Cell 3:1412-1422

92. Pachlinger, R., Mitterbauer, R., Adam, G. & Strauss, J. 2005 Metabolically independent and accurately adjustable Aspergillus sp. expression system. Appl. Env. Microbiol.  71:672-678

93. Panaccione, D.G. & Coyle, C.M. 2005 Abundant respirable ergot alkaloids from the common airborne fungus Aspergillus fumigatus. Appl. Env. Microbiol. 71:3106-3111

94. Peńalva, M.A. & Arst, H.N,Jr. 2004 Recent advances in the characterization of ambient pH regulation of gene expression in filamentous fungi and yeasts. Ann. Rev. Microbiol. 58:425-451

95. Peng, J., Huang, C.-H., Short, M.K. & Jubinsky, P. 2005 Magmas gene structure and evolution. In Silico Biol. 5:0024.

96. Polotnianka, R., Monohan, B.J., Hynes, M.J. & Davis, M.A. 2004 TamA interacts with LeuB, the homologue of Saccharomyces cervisiae Leu3p, to regulate gdhA expression in Aspergillus nidulans. Mol. Genet. Genomics 272:452-459

97. Price, M.S., Conners, S.B., Tachdjian, S., Kelly, R.M. & Payne, G.A. 2005 Aflatoxin conducive and non-conducive growth conditions reveal new gene associations with aflatoxin production. Fungal Genet. Biol. 42:506-518

98. Prigozhina, N.L., Oakley, C.E., Lewis, A.M., Nayak. T., Osmani, S.A. & Oakley, B.R. 2004 g-tubulin plays an essential role in the coordination of mitotic events. Mol. Biol. Cell 15:1374-1386

99. Riquelme, M., Fischer, R. & Bartnicki-García, S. 2003 Apical growth and mitosis are independent processes in Aspergillus nidulans. Protoplasma 222:211-215

100. Rooney, A.P. & Ward, T.J. 2005 Evolution of a large ribosomal RNA multigene family in filamentous fungi: birth and death of a concerted evolution paradigm. Proc. Natl. Acad. Sci. USA 102:5084-5089

101. Roze, L.V., Beaudry, R.M., Keller, N.P. & Linz, J.E. 2004 Regulation of aflatoxin synthesis by FadA/cAMP/protein kinase A signaling in Aspergillus parasiticus. Mycopathologia 158:219-232

102. Sampson, K. & Heath, I.B. 2005 The dynamic behaviour of microtubules and their contributions to hyphal tip growth in Aspergillus nidulans. Microbiol. 151:1543-1555

103. Sazer, S. 2005 Nuclear envelope: nuclear pore complexity. Curr. Biol. 15:R23-26

104. Schaarschmidt, S., Qu, N., Strack, D., Sonnewald, U. & Hause, B. 2004 Local induction of the alc gene switch in transgenic tobacco plants by acetaldehyde. Plant Cell Physiol. 45:1566-1577

105. Schoustra, S.E., Slakhorst, M., Debets, A.J.M. & Hoekstra, R.F. 2005 Comparing artificial and natural selection in rate of adaptation to genetic stress in Aspergillus nidulans. J. Evol. Biol. 18:771-778

106. Schrettl, M., Winkelmann, G. & Haas, H. 2004 Ferrichrome in Schizosaccharomyces pombe – an iron transport and iron storage compound. BioMetals 17:647-654

107. Semighini, C.P., Goldman, M.H. & Goldman, G.H. 2004 Multi-copy suppression of an Aspergillus nidulans mutant sensitive to camptothecin by a putative monocarboxylate transporter. Curr. Microbiol. 49:229-233

108. Seo, J.-A., Han, K.-H. & Yu, J.-H. 2004 The gprA and gprB genes encode putative G protein-coupled receptors required for self-fertilization in Aspergillus nidulans. Mol. Microbiol. 53:1611-1623

109. Seshime, Y., Juvvadi, P.R., Fujii, I. & Kitamoto, K. 2005 Discovery of a novel superfamily of type III polyketide synthases in Aspergillus oryzae. Biochem. Biophys. Res. Commun.  331:253-260

110. Shaw, B.D. & Upadhyay, S. 2005 Aspergillus nidulans swoK encodes an RNA binding protein that is important for cell polarity. Fungal Genet. Biol. 42:862-872

111. Shuster, A., Osherov, N. & Rosenberg, M. 2004 Alcohol-mediated haemolysis in yeast. Yeast 21:1335-1342

112. Sims, A.H., Gent, M.E., Lanthaler, K., Dunn-Coleman, N.S., Oliver, S.G. & Robson, G.D. 2005 Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo. Appl. Env, Microbiol. 71:2737-2747

113. Sims, A.H., Gent, M.E., Robson, G.D., Dunn-Coleman, N.S. & Oliver, S.G. 2004 Combining transcriptome data with genomic and cDNA sequence alignments to make confident functional assignments for Aspergillus nidulans genes. Mycol. Res. 108:853-857

114. Smiley, J.A., Kundracik, M., Landfried, D.A., Barnes, V.R.Sr. & Axhemi, A.A. 2005 Genes of the thymidine salvage pathway: thymine-7-hydroxylase from a Rhodotorula glutinis cDNA library and iso-orotate decarboxylase from Neurospora crassa. Biochim. Biophys. Acta 1723:256-264

115. Souza-Júnior, S.A. & Castro-Prado, M.A. 2005 Chlorhexidine digluconate induces mitotic recombination in diploid cells of Aspergillus nidulans. Oral Diseases 11:146-150

116. Steidl, S., Tüncher, A., Goda, H., Guder, C., Papadopoulou, N., Kobayashi, T., Tsukagoshi, N., Kato, M. & Brakhage, A.A. 2004 A single subunit of a heterotrimeric CCAAT-binding complex carries a nuclear localization signal: piggy back transport of the pre-assembled complex to the nucleus. J. Mol. Biol. 342:515-524

117. Storms, R., Zheng, Y., Li, H., Sillaots, S., Martinez-Perez, A. & Tsang, A. 2005 Plasmid vectors for protein production, gene expression and molecular manipulations in Aspergillus niger. Plasmid 53:191-204

118. Souza-Júnior, S.A., Gonçalves, E.A.L., Catanzaro-Guimăraes, S.A.III & Castro-Prado, M.A.A. 2004 Loss of heterozygosity by mitotic recombination in diploid strain of Aspergillus nidulans in response to castor oil plant detergent. Brazil. J. Biol. 64:885-890

119. Ström, K., Schnürer, J. & Melin, P. 2005 Co-cultivation of antifungal Lactobacillus plantarum MiLAB 393 and Aspergillus nidulans, evaluation of effects on fungal growth and protein expression. FEMS Microbiol. Lett. 246:119-124

120. Takahashi, T., Hatamoto, O., Koyama, Y. & Abe, K. 2004 Efficient gene disruption in the koji-mold Aspergillus sojae using a novel variation of the positive-negative selection. Mol. Genet. Genomics 272:344-352

121. Takahashi, T., Maeda, H., Yoneda, S., Ohtaki, S., Yamagata, Y., Hasegawa, F., Gomi, K., Nakajima, T. & Abe, K. 2005 the fungal hydrophobin RolA recruits polyesterase and laterally moves on hydrophobic surfaces. Mol. Microbiol. 57:1780-1796

122. Takasaki, K., Shoun, H., Nakamura, A., Hoshino, T. & Takaya, N. 2004 Unusual transcription regulation of the niaD gene under anaerobic conditions supporting fungal ammonia fermentation. Biosci. Biotechnol. Biochem. 68:978-980

123. Takeshita, N., Ohta, A. & Horiuchi, H. 2005 CsmA, a class V chitin synthase with a myosin motor-like domain, is localized through direct interaction with the actin cytoskeleton in Aspergillus nidulans. Mol. Biol. Cell 16:1961-1970

124. te Biesebeke, R., Levin, A., Sagt, C., Bartels, J., Goosen, T., Ram, A., van den Hondel, C. & Punt, P. 2005 Identification of growth phenotype-related genes in Aspergillus oryzae by heterologous macroarray and suppression subtractive hybridization. Mol. Genet. Genomics 273:33-42

125. Temporini, E.D., Alvarez, M.E., Mautino. M.R., Folco, H.D. & Rosa, A.L. 2004 The Neurospora crassa cfp promoter drives a carbon source-dependent expression of transgenes in filamentous fungi. J. Appl. Microbiol.. 96:1256-1264

126. Trojer, P., Dangl, M., Bauer, I., Graessle, S., Loidl, P. & Brosch, G. 2004 Histone methyltransferases in Aspergillus nidulans: evidence for a novel enzyme with a unique substrate specificity. Biochemistry.  43:10834-10843

127. Tsitsigiannis, D.I., Bok, J.-W., Andes, D., Nielsen, K.F., Frisvad, J.C. & Keller, N.P. 2005 Aspergillus cyclooxygenase-like enzymes are associated with prostaglandin production and virulence. Infect. Immun. 73:4548-4559

128. Tsitsigiannis, D.I., Kowieski, T.M., Zarnowski, R. & Keller, N.P. 2004 Endogenous lipogenic regulators of spore balance in Aspergillus nidulans. Eukaryot. Cell 3:1398-1411

129. Tsitsigiannis, D.I., Kowieski, T.M., Zarnowski, R. & Keller, N.P. 2005 Three putative oxylipin biosynthetic genes integrate sexual and asexual development in Aspergillus nidulans. Microbiol. 151:1809-1821

130. Uchida, M., Roberson, R.W., Chun, S.-J. & Kim, D.-S. 2005 In vivo effects of the fungicide ethaboxam on microtubule integrity in Phytophthora infestans. Pest Manag. Sci.  61:787-792

131. Unkles, S.E., Rouch, D.A., Wang, Y., Siddiqi, M.Y., Okamoto, M., Stephenson, R.M., Kinghorn, J.R. & Glass, A.D. 2005 Determination of the essentiality of the eight cysteine residues of the NrtA protein for high-affinity nitrate transport and the generation of a functional cysteine-less transporter. Biochemistry. 44:5471-5477

132. Unsöld, A. & Li, S.-M. Overproduction, purification and characterization of FgaPT2, a dimethylallyltryptophan synthase from Aspergillus fumigatus. Microbiol. 151:1499-1505

133. Varadarajalu, L.P. & Punekar, N.S. 2005 Cloning and use of sC as homologous marker for Aspergillus niger transformation. J. Microbiol. Meth. 61:219-224

134. Vicentefranqueira, R., Moreno, M.A., Leal, F. & Calera, J.A. 2005 The zrfA and zrfB genes of Aspergillus fumigatus encode the zinc transporter proteins of a zinc uptake system induced in an acid, zinc-depleted environment. Eukaryot. Cell 4:837-848

135. Vienken, K., Scherer, M. & Fischer, R. 2005 The Zn(II)2Cys6 putative Aspergillus nidulans transcription factor repressor of sexual development inhibits sexual development under low-carbon conditions and in submersed culture. Genetics 169:619-630

136. Wang, T.H., Zhong, Y.H., Huang, W., Liu, T. & You, Y.W. 2005 Antisense inhibition of xylitol dehydrogenase gene, xdh1 from Trichoderma reesei. Lett. Appl. Microbiol. 40:424-429

137. Watanabe, A. & Ebizuka, Y. 2004 Unprecedented mechanism of chain length determination in fungal aromatic polyketide synthases. Chem. Biol. 11:1101-1106

138. Weber, W., Rimann, M., Spielmann, M., Keller, B., Daoud-El Baba, M., Aubel, D., Weber, C.C. & Fussenegger, M. 2004 Gas-inducible transgene expression in mammalian cells and mice. Nature Biotechnol. 22:1440-1444

139. Wen, Y., Hatabayashi, H., Arai, H., Kitamoto, H.K. & Yabe, K. 2005 Function of the cypX and moxY genes in aflatoxin biosynthesis in Aspergillus parasiticus. Appl.. Env. Microbiol. 71:3192-3198

140. Wenzl, P., Wong, L., Kwang-won, K. & Jefferson, R.A. 2005 A functional screen identifies lateral transfer of b-glucuronidase (gus) from bacteria to fungi. Mol. Biol. Evol. 22:308-316

141. Wilson, R.A., Calvo, A.M., Chang, P.-K. & Keller, N.P. 2004 Characterization of the Aspergillus parasiticus D12-desaturase gene: a role for lipid metabolism in the Aspergillus-seed interaction. Microbiology 150:2881-2888

142. Woodard, R.W. 2004 Unique biosynthesis of dehydroquinic acid? Bioorganic Chem. 32:309-315

143. Wu, D., Dou, X., Hashmi, S.B. & Osmani, S.A. 2004 The Pho80-like cyclin of Aspergillus nidulans regulates development independently of its role in phosphate acquisition. J. Biol. Chem. 279:37693-37703

144. Xue, T., Nguyen, C.K., Romans, A., Kontoyiannis, D.P. & May, G.S. 2004 Isogenic auxotrophic mutant strains in the Aspergillus fumigatus genome reference strain AF293. Arch. Microbiol. 182:346-353

145. Yabe, K. & Nakajima, H. 2004 Enzyme reactions and genes in aflatoxin biosynthesis. Appl. Microbiol. Biotechnol. 64:745-755

146. Yamada, E., Ichinomiya, M., Ohta, A. & Horiuchi, H. 2005 The class V chitin synthase gene csmA is crucial for the growth of the chsA chsC double mutant in Aspergillus nidulans. Biosci. Biotechnol. Biochem. 69:87-97

147. Yang, L., Ukil, L., Osmani, A., Nahm, F., Davies, J., De Souza, C.P.C., Dou, X., Perez-Balaguer, A. & Osmani, S.A. 2004 Rapid production of gene replacement constructs and generation of a green fluorescent protein-tagged centromeric marker in Aspergillus nidulans. Eukaryot. Cell 3:1359-1362

148. Yu, J.-H., Hamari, Z., Han, K.-H., Seo, J.-A., Reyes-Domínguez, Y. & Scazzocchio, C. 2004 Double-joint PCR: a PCR-based molecular tool for gene manipulations in filamentous fungi. Fungal Genet. Biol. 41:973-981

149. Zarrin, M., Leeder, A.C. & Turner, G. 2005 A rapid method for promoter exchange in Aspergillus nidulans using recombinant PCR. Fungal Genet. Biol. 42:1-8

150. Zhang, Y.-Q., Brock, M. & Keller, N.P. 2004 Connection of propionyl-CoA metabolism to polyketide biosynthesis in Aspergillus nidulans. Genetics 168:785-794

151. Zhao, L., Schaefer, D. & Marten, M.R. 2005 Assessment of elasticity and topography of Aspergillus nidulans spores via atomic force microscopy. Appl. Env. Microbiol. 71:955-960

152. Zhao, L., Schaefer, D., Xu, H., Modi, S.J., LaCourse, W.R. & Marten, M.R. 200 Elastic properties of the cell wall of Aspergillus nidulans studied with atomic force microscopy. Biotechnol. Prog. 21:292-299


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