2009 Neurospora Bibliography

This bibliography represents my attempt to collect all works dealing substantially with Neurospora. Please let me know of anything published in 2008 or 2009 that is not included here or in the previous bibliography, so that it might be mentioned next year. I would be especially happy to hear of chapters from books, and articles from journals not indexed in major bibliographic services. Please also let me know of any errors in citation. Please send reprints or copies of articles to the Fungal Genetics Stock Center.

Craig Wilson, 15236 Ashworth Ave. N., Shoreline WA 98133, USA (chwilso@gmail.com)


Cross reference of author's names


  1. Aanen, D.K., Debets, A.J.M., de Visser, J.A.G.M., and Hoekstra, R.F. 2008. The social evolution of somatic fusion. Bioessays 30:1193-1203.

  2. Adhvaryu, K.K., and Selker, E.U. 2008. Protein phosphatase PP1 is required for normal DNA methylation in Neurospora. Genes Dev. 22:3391-3396.

  3. Adio, S., and Woehlke, G. 2009. Properties of the Kinesin-3 NcKin3 motor domain and implications for neck function. FEBS J. 276:3641-3655.

  4. Aiyar, R.S., Gagneur, J., and Steinmetz, L.M. 2008. Identification of mitochondrial disease genes through integrative analysis of multiple datasets. Methods 46:248-255.

  5. Akman, O.E., Ciocchetta, F., Degasperi, A., and Guerriero, M.L. 2009. Modelling biological clocks with bio-pepa: stochasticity and robustness for the Neurospora crassa circadian network. Lect. Notes Bioinform. 5688:52-67.

  6. Aldabbous, M. 2009. Isolation and characterization of Neurospora cell wall biosynthesis and anastomosis-defective mutants. Thesis (Ph.D.)--State University of New York at Buffalo, 176 p.

  7. Aleman-Meza, B., Yu, Y.H., Schuttler, H.B., Arnold, J., and Taha, T.R. 2009. KINSOLVER: A simulator for computing large ensembles of biochemical and gene regulatory networks. Comput. Math. Appl. 57:420-435.

  8. Aliyari, R., and Ding, S.W. 2009. RNA-based viral immunity initiated by the Dicer family of host immune receptors. Immunol. Rev. 227:176-188.

  9. Allgaier, S., Taylor, R.D., Brudnaya, Y., Jacobson, D.J., Cambareri, E., and Stuart, W.D. 2009. Vaccine production in Neurospora crassa. Biologicals 37:128-132.

  10. Allgaier, S., Weiland, N., Hamad, I., and Kempken, F. 2009. Expression of ribonuclease A and ribonuclease N(1) in the filamentous fungus Neurospora crassa. Appl. Microbiol. Biotechnol. doi:10.1007/s00253-009-2161-y

  11. Allis, C.D., Jenuwein, T., Reinberg, D., and Caparros, M.-L. 2009. Epigenetics. Cold Spring Harbor, N.Y.: CSH Press/Cold Spring Harbor Laboratory Press. x, 502 p.

  12. Angarita-Jaimes, N.C., Roca, M.G., Towers, C.E., Read, N.D., and Towers, D.P. 2009. Algorithms for the automated analysis of cellular dynamics within living fungal colonies. Cytometry A 75:768-780.

  13. Araujo-Palomares, C.L., Riquelme, M., and Castro-Longoria, E. 2009. The polarisome component SPA-2 localizes at the apex of Neurospora crassa and partially colocalizes with the Spitzenkorper. Fungal Genet. Biol. 46:551-563.

  14. Arnett, D.R., Lorimer, H.E., and Asch, D.K. 2009. Catabolite repression directly affects transcription of the qa-y gene of Neurospora crassa. Fungal Genet. Biol. 46:377-380.

  15. Bahn, Y.-S. 2008. Master and commander in fungal pathogens: the two-component system and the HOG signaling pathway. Eukaryotic Cell 7:2017-2036.

  16. Baird, N.A., Etter, P.D., Atwood, T.S., Currey, M.C., Shiver, A.L., Lewis, Z.A., Selker, E.U., Cresko, W.A., and Johnson, E.A. 2008. Rapid SNP discovery and genetic mapping using sequenced RAD markers. PLoS One 3: e3376.

  17. Baker, C.L., Kettenbach, A.N., Loros, J.J., Gerber, S.A., and Dunlap, J.C. 2009. Quantitative proteomics reveals a dynamic interactome and phase-specific phosphorylation in the Neurospora circadian clock. Mol. Cell 34:354-363.

  18. Basile, L.J. 2008. Cyanide-degrading enzymes for bioremediation. Thesis (M.S.)--Texas A&M University. ix, 43 p.

  19. Bastian, F., Bouziri, L., Nicolardot, B., and Ranjard, L. 2009. Impact of wheat straw decomposition on successional patterns of soil microbial community structure. Soil Biol. Biochem. 41:262-275.

  20. Bay, D.C., O'Neil, J.D., and Court, D.A. 2008. The influence of sterols on the conformation of recombinant mitochondrial porin in detergent. Biochem. Cell Biol. 86:539-545.

  21. Becker, T., Gebert, M., Pfanner, N., and van der Laan, M. 2009. Biogenesis of mitochondrial membrane proteins. Curr. Opin. Cell Biol. 21:484-493.

  22. Bell-Pedersen, D., and Borkovich, K.A. 2009. The 2009 George W. Beadle Award: Jay C. Dunlap. Genetics 181:831-833.

  23. Bogdanovic, O., and Veenstra, G.J.C. 2009. DNA methylation and methyl-CpG binding proteins: developmental requirements and function. Chromosoma 118:549-565.

  24. Bonito, G., Isikhuemhen, O.S., and Vilgalys, R. Identification of fungi associated with municipal compost using DNA-based techniques. Bioresour. Technol. 101:1021-1027.

  25. Bowman, B.J., Draskovic, M., Freitag, M., and Bowman, E.J. 2009. Structure and distribution of organelles and cellular location of calcium transporters in Neurospora crassa. Eukaryotic Cell. doi:10.1128/EC.00174-09

  26. Brody, S., Oelhafen, K., Schneider, K., Perrino, S., Goetz, A., Wang, C., and English, C. 2009. Circadian rhythms in Neurospora crassa: downstream effectors. Fungal Genet. Biol. doi:10.1016/j.fgb.2009.09.006

  27. Bushley, K.E., Ripoll, D.R., and Turgeon, B.G. 2008. Module evolution and substrate specificity of fungal nonribosomal peptide synthetases involved in siderophore biosynthesis. BMC Evol. Biol. 8:328.

  28. Carvalho, M.B., Martins, I., Leitao, M.C., Garcia, H., Rodrigues, C., San Romao, V., McLellan, I., Hursthouse, A., and Silva Pereira, C. 2009. Screening pentachlorophenol degradation ability by environmental fungal strains belonging to the phyla Ascomycota and Zygomycota. J. Ind. Microbiol. Biotechnol. 36:1249-1256.

  29. Cecere, G., and Cogoni, C. 2009. Quelling targets the rDNA locus and functions in rDNA copy number control. BMC Microbiol. 9:44.

  30. Cha, J., Chang, S.S., Huang, G., Cheng, P., and Liu, Y. 2008. Control of WHITE COLLAR localization by phosphorylation is a critical step in the circadian negative feedback process. EMBO J. 27:3246-3255.

  31. Chadee, A.B., Bhaskaran, H., and Russell, R. 2009. Protein roles in group I intron RNA folding: The tyrosyl-tRNA synthetase CYT-18 stabilizes the native state relative to a long-lived misfolded structure without compromising folding kinetics. J. Mol. Biol. doi:10.1016/j.jmb.2009.11.009

  32. Chae, M.S. 2008. Examination of alternative oxidase induction in Neurospora crassa. Thesis (Ph.D.)--University of Alberta. 92 p.

  33. Chae, M.S., and Nargang, F.E. 2009. Investigation of regulatory factors required for alternative oxidase production in Neurospora crassa. Physiol. Plant. 137:407-418

  34. Chen, E.H. 2008. Cell fusion : overviews and methods. Totowa, N.J.: Humana. xi, 421 p.

  35. Chen, C.H., and Loros, J.J. 2009. Neurospora sees the light: Light signaling components in a model system. Commun. Integr. Biol. 2:448-451.

  36. Chen, C.H., Ringelberg, C.S., Gross, R.H., Dunlap, J.C., and Loros, J.J. 2009. Genome-wide analysis of light-inducible responses reveals hierarchical light signalling in Neurospora. EMBO J. 28:1029-1042.

  37. Clark, T.A., J.M. Guilmette, D. Renstrom, and J.P. Townsend. 2008. RNA extraction, probe preparation, and competitive hybridization for transcriptional profiling using Neurospora crassa long-oligomer DNA microarrays. Fungal Genet. Reports 55:18-28

  38. Colombini, M. 2009. The published 3D structure of the VDAC channel: native or not? Trends Biochem. Sci. 34:382-389.

  39. da Silva, C.C., Cruz, R.C., Bucciarelli-Rodriguez, M., and Vilas-Boas, A. 2009. Neurospora crassa mat A-2 and mat A-3 proteins weakly interact in the yeast two-hybrid system and affect yeast growth. Genet. Mol. Biol. 32:354-361.

  40. de Almeida, F.M., Bonini, B.M., Beton, D., Jorge, J.A., Terenzi, H.F., and da Silva, A.M. 2009. Heterologous expression in Escherichia coli of Neurospora crassa neutral trehalase as an active enzyme. Protein Expr. Purif. 65:185-189.

  41. Del Campo, M., Mohr, S., Jiang, Y., Jia, H., Jankowsky, E., and Lambowitz, A.M. 2009. Unwinding by local strand separation is critical for the function of DEAD-box proteins as RNA chaperones. J. Mol. Biol. 389:674-693.

  42. Dent, K.C., Weber, B.W., Benedik, M.J., and Sewell, B.T. 2009. The cyanide hydratase from Neurospora crassa forms a helix which has a dimeric repeat. Appl. Microbiol. Biotechnol. 82:271-278.

  43. Dettman, J.R., Anderson, J.B., and Kohn, L.M. 2009. Genome-wide investigation of reproductive isolation in experimental lineages and natural species of Neurospora: identifying candidate regions by microarray-based genotyping and mapping. Evolution. doi:10.1111/j.1558-5646.2009.00863.x

  44. Diaz, A., Valdes, V.J., Rudino-Pinera, E., Horjales, E., and Hansberg, W. 2009. Structure-function relationships in fungal large-subunit catalases. J. Mol. Biol. 386:218-232.

  45. Diernfellner, A.C., Querfurth, C., Salazar, C., Hofer, T., and Brunner, M. 2009. Phosphorylation modulates rapid nucleocytoplasmic shuttling and cytoplasmic accumulation of Neurospora clock protein FRQ on a circadian time scale. Genes Dev. 23:2192-2200.

  46. Dogaris, I., Karapati, S., Mamma, D., Kalogeris, E., and Kekos, D. 2009. Hydrothermal processing and enzymatic hydrolysis of sorghum bagasse for fermentable carbohydrates production. Bioresour. Technol. 100:6543-6549.

  47. Dogaris, I., Vakontios, G., Kalogeris, E., Mamma, D., and Kekos, D. 2009. Induction of cellulases and hemicellulases from Neurospora crassa under solid-state cultivation for bioconversion of sorghum bagasse into ethanol. Ind. Crops Prod. 29:404-411.

  48. Dolderer, B., Hartmann, H.-J., and Weser, U. 2009. Metallothioneins in yeast and fungi. In: Metal Ions in Life Sciences. Sigel, A. (ed). Cambridge: Royal Society of Chemistry, pp. 83-105.

  49. Dongo, A., Bataille-Simoneau, N., Campion, C., Guillemette, T., Hamon, B., Iacomi-Vasilescu, B., Katz, L., and Simoneau, P. 2009. The group III two-component histidine kinase of filamentous fungi is involved in the fungicidal activity of the bacterial polyketide ambruticin. Appl. Environ. Microbiol. 75:127-134.

  50. dos Reis, M., and Wernisch, L. 2009. Estimating translational selection in eukaryotic genomes. Mol. Biol. Evol. 26:451-461.

  51. Duarte, M., and Videira, A. 2008. Respiratory chain organization in Neurospora crassa upon disruption of mitochondrial bc(1) complex. Biochim. Biophys. Acta Bioenerg. 1777:S41-S42.

  52. Duarte, M., and Videira, A. 2009. Effects of mitochondrial complex III disruption in the respiratory chain of Neurospora crassa. Mol. Microbiol. 72:246-258.

  53. Dukanovic, J., Dimmer, K.S., Bonnefoy, N., Krumpe, K., and Rapaport, D. 2009. Genetic and functional interactions between the mitochondrial outer membrane proteins Tom6 and Sam37. Mol. Cell. Biol. 29:5975-5988.

  54. Durrens, P., Nikolski, M., and Sherman, D. 2008. Fusion and fission of genes define a metric between fungal genomes. PLoS Comput. Biol. 4:e1000200.

  55. Elstner, M., Andreoli, C., Klopstock, T., Meitinger, T., and Prokisch, H. 2009. The mitochondrial proteome database: MitoP2. Meth. Enzymol. 457:3-20.

  56. Ferguson-Smith, A.C., Greally, J.M., and Martienssen, R.A. (eds.). 2008. Epigenomics. Springer. xiv, 438 p.

  57. Fischle, W. 2008. Talk is cheap-cross-talk in establishment, maintenance, and readout of chromatin modifications. Genes Dev. 22:3375-3382.

  58. Fleissner, A., Diamond, S., and Glass, N.L. 2009. The Saccharomyces cerevisiae PRM1 homolog in Neurospora crassa is involved in vegetative and sexual cell fusion events but also has postfertilization functions. Genetics 181:497-510.

  59. Fleissner, A., Leeder, A.C., Roca, M.G., Read, N.D., and Glass, N.L. 2009. Oscillatory recruitment of signaling proteins to cell tips promotes coordinated behavior during cell fusion. Proc. Natl. Acad. Sci. USA 106:19387-19392.

  60. Flurkey, W.H., and Inlow, J.K. 2008. Proteolytic processing of polyphenol oxidase from plants and fungi. J. Inorg. Biochem. 102:2160-2170.

  61. Francis, K., and Gadda, G. 2009. Inflated kinetic isotope effects in the branched mechanism of Neurospora crassa 2-nitropropane dioxygenase. Biochemistry 48:2403-2410.

  62. Francis, K., and Gadda, G. 2009. Kinetic evidence for an anion binding pocket in the active site of nitronate monooxygenase. Bioorg Chem 37:167-172.

  63. Freitas, F.Z., Paula, R.M., Barbosa, L.C., Terenzi, H.F., and Bertolini, M.C. 2009. cAMP signaling pathway controls glycogen metabolism in Neurospora crassa by regulating the glycogen synthase gene expression and phosphorylation. Fungal Genet. Biol. doi:10.1016/j.fgb.2009.10.011

  64. Gadda, G., and Francis, K. 2009. Nitronate monooxygenase, a model for anionic flavin semiquinone intermediates in oxidative catalysis. Arch. Biochem. Biophys. doi:10.1016/j.abb.2009.06.018

  65. Gamsby, J.J., Loros, J.J., and Dunlap, J.C. 2009. A phylogenetically ponserved DNA damage response resets the circadian clock. J. Biol. Rhythms 24:193-202.

  66. Gellerman, G., Pariente, N., Paz, Z., Shnaiderman, A., and Yarden, O. 2009. Synthesis and antifungal activity of beta-trifluoroalkyl aminovinyl ketone derivatives. J. Agric. Food Chem. 57:8303-8307.

  67. Gentz, P.M., Blatch, G.L., and Dorrington, R.A. 2009. Dimerization of the yeast eukaryotic translation initiation factor 5A requires hypusine and is RNA dependent. FEBS J. 276:695-706.

  68. Gerard, C., Gonze, D., and Goldbeter, A. 2009. Dependence of the period on the rate of protein degradation in minimal models for circadian oscillations. Philos. Transact. A Math. Phys. Eng. Sci. 367:4665-4683.

  69. Gras, D.E., Silveira, H.C., Peres, N.T., Sanches, P.R., Martinez-Rossi, N.M., and Rossi, A. 2009. Transcriptional changes in the nuc-2A mutant strain of Neurospora crassa cultivated under conditions of phosphate shortage. Microbiol. Res. 164:658-664.

  70. Gronenborn, A.M. 2009. Structures of CVNH family lectins. In: Biophysics and the Challenges of Emerging Threats. Puglisi, J.D. (ed): Springer, pp. 43-50.

  71. Guo, J., Cheng, P., Yuan, H., and Liu, Y. 2009. The exosome regulates circadian gene expression in a posttranscriptional negative feedback loop. Cell 138:1236-1246.

  72. Gurnoor, K., Neelam, V., and Wheatley, D.N. 2008. Comparison of various cell disruption techniques for the extraction of arginase from Neurospora crassa. Res. J. Biotechnol. 3:39-44.

  73. Harris, S.D. 2008. Branching of fungal hyphae: regulation, mechanisms and comparison with other branching systems. Mycologia 100:823-832.

  74. Hatakeyama, S., Atsuko, I., Mika, Y., Yunxia, H., Shuuitsu, T., and Hirokazu, I. 2008. Neurospora crassa mus-16 gene encodes Saccharomyces cerevisiae Rtt109 homolog. Genes Genet. Syst. 83:480-480.

  75. Hawkins, P.G., and Morris, K.V. 2008. RNA and transcriptional modulation of gene expression. Cell Cycle 7:602-607.

  76. Heffler, E., Nebiolo, F., Pizzimenti, S., Ferlini, M., Marchese, C., and Rolla, G. 2009. Occupational asthma caused by Neurospora sitophila sensitization in a coffee dispenser service operator. Ann. Allergy Asthma Immunol. 102:168-169.

  77. Held, M., Edwards, C. and Nicolau, D. 2009. Fungal intelligence; or on the behaviour of microorganisms in confined micro-environments. J. Phys. Conf. Ser. 178: art. no. 012005.

  78. Held, M., Komaromy, A., Fulga, F., Edwards, C., Boysen, R.I., Hearn, M.T.W., and Nicolau, D.V. 2009. Dynamic behaviour of microorganisms on microstructures. Microelectronic Eng. 86:1455-1458.

  79. Herter, J.M.G.A. 2008. Untersuchungen zur funktion von FKBP13 in Neurospora crassa. Untersuchung der proteininteraktionen von NcFKBP13 und screening nach einem phänotyp einer FKBP13 deletionsmutante. Thesis (Ph.D)--Albert-Ludwigs-Universität. 99 p.

  80. Hiltunen, J.K., Schonauer, M.S., Autio, K.J., Mittelmeier, T.M., Kastaniotis, A.J., and Dieckmann, C.L. 2009. Mitochondrial fatty acid synthesis type II: more than just fatty acids. J. Biol. Chem. 284:9011-9015.

  81. Honda, S., and Selker, E.U. 2009. Tools for fungal proteomics: multifunctional Neurospora vectors for gene replacement, protein expression and protein purification. Genetics 182:11-23.

  82. Hong, C.I., Zamborszky, J., and Csikasz-Nagy, A. 2009. Minimum criteria for DNA damage-induced phase advances in circadian rhythms. PLoS Comput. Biol. 5:e1000384.

  83. Hood, H.M., Neafsey, D.E., Galagan, J., and Sachs, M.S. 2009. Evolutionary roles of upstream open reading frames in mediating gene regulation in fungi. Annu. Rev. Microbiol. 63:385-409.

  84. Hood, H.M., Radford, A. and Sachs, M.S. 2008. Recommendations for assigning symbols and names to Neurospora crassa genes now that its genome has been sequenced. Fungal Genet. Reports 55:29-31

  85. Hutchison, E., Brown, S., Tian, C., and Glass, N.L. 2009. Transcriptional profiling and functional analysis of heterokaryon incompatibility in Neurospora crassa reveals that ROS, but not metacaspases, are associated with programmed cell death. Microbiology. doi:10.1099/mic.0.032284-0

  86. Ivashchenko, A.T., Tauasarova, M.I., and Atambayeva, S.A. 2009. Exon-intron structure of genes in complete fungal genomes. Mol. Biol. 43:24-31.

  87. Iyer, S.V., Ramakrishnan, M., and Kasbekar, D.P. 2009. Neurospora crassa fmf-1 encodes the homologue of the Schizosaccharomyces pombe Ste11p regulator of sexual development. J. Genet. 88:33-39.

  88. Jha, N., Mohanka, R., and Azad, R. 2009. Antifungal Investigation of the constituents of Moringa oleifera lamk. root bark extract. Asian J. Chem. 21:7437-7439.

  89. Jones, C.A. 2008. Two-component signaling pathways in the filamentous fungus, Neurospora crassa. Thesis (Ph.D.)--University of California, Riverside, xii, 198 leaves.

  90. Jonkers, W., and Rep, M. 2009. Lessons from fungal F-Box proteins. Eukaryotic Cell 8:677-695.

  91. Jun-fang, L., Zhi-ming, L., Xiao-yang, C., Li-qiong, G., and Jie, W. 2009. [Evaluation of assay methods for determining fungal laccase activity]. Shengwu Jiagong Guocheng 7:1-8.

  92. Justa-Schuch, D., Schmitz, C., and Seiler, S. 2009. Distinct functions of two RHO4 exchange factors during septum formation in Neurospora crassa. Eur. J. Cell Biol. 88:57-57.

  93. Kasuga, T., Mannhaupt, G., and Glass, N.L. 2009. Relationship between phylogenetic distribution and genomic features in Neurospora crassa. PLoS One 4:e5286.

  94. Kaur, G., Verma, N., and Wheatley, D.N. 2009. Production and over-expression of arginase with enhanced enzyme activity by an efficient recombinant Escherichia coli system. Romanian Biotechnological Letters 14:4334-4341.

  95. Kaushik, G., and Thakur, I.S. 2009. Isolation of fungi and optimization of process parameters for decolorization of distillery mill effluent. World J. Microbiol. Biotechnol. 25:955-964.

  96. Keeney, S. 2009. Meiosis, Vol 2: Cytological Methods. Totowa NJ: Humana Press. 446 p.

  97. Khan, A.A.H., Karuppayil, S.M., Manoharachary, C., Kunwar, I.K., and Waghray, S. 2009. Isolation, identification and testing for allergenicity of fungi from air-conditioned indoor environments. Aerobiologia 25:119-123.

  98. Kim, T.S. 2009. Understanding the genetic basis of natural variation in the regulation of circadian clock of Neurospora crassa. Thesis (Ph.D.)--Cornell University, xii, 153 leaves.

  99. Kiran, I., Ilhan, S., Caner, N., Iscen, C.F., and Yildiz, Z. 2009. Biosorption properties of dried Neurospora crassa for the removal of Burazol Blue ED dye. Desalination 249:273-278.

  100. Kiranmayi, P., Tiwari, A., Sagar, K.P., Haritha, A., and Mohan, P.M. 2009. Functional characterization of tzn1 and tzn2-zinc transporter genes in Neurospora crassa. Biometals 22:411-420.

  101. Kito, H., Fujikawa, T., Moriwaki, A., Tomono, A., Izawa, M., Kamakura, T., Ohashi, M., Sato, H., Abe, K., and Nishimura, M. 2008. MgLig4, a homolog of Neurospora crassa Mus-53 (DNA ligase IV), is involved in, but not essential for, non-homologous end-joining events in Magnaporthe grisea. Fungal Genet. Biol. 45:1543-1551.

  102. Kurashima, K., Kato, A., Sawada, S., Hatakeyama, S., Tanaka, S., and Inoue, H. 2008. Novel gene of which mutation causes the hyphal growth defect, encodes the F-box protein in Neurospora. Genes Genet. Syst. 83:480-480.

  103. Kutter, S. 2009. Die regulation der pyruvatdecarboxylasen aus den schlauchpilzen Kluyveromyces lactis, Saccharomyces cerevisiae und Neurospora crassa. Halle (Saale), Univ., Diss. 129, [125] Bl.

  104. Lamb, J.S., Zoltowski, B.D., Pabit, S.A., Li, L., Crane, B.R., and Pollack, L. 2009. Illuminating solution responses of a LOV domain protein with photocoupled small-angle X-ray scattering. J. Mol. Biol. 393:909-919.

  105. Lambreghts, R., Shi, M., Belden, W.J., DeCaprio, D., Park, D., Henn, M.R., Galagan, J.E., Basturkmen, M., Birren, B.W., Sachs, M.S., Dunlap, J.C., and Loros, J.J. 2009. A high-density single nucleotide polymorphism map for Neurospora crassa. Genetics 181:767-781.

  106. Larrondo, L.F., Colot, H.V., Baker, C.L., Loros, J.J., and Dunlap, J.C. 2009. Fungal functional genomics: tunable knockout-knock-in expression and tagging strategies. Eukaryotic Cell 8:800-804.

  107. Leal, J., Squina, F.M., Freitas, J.S., Silva, E.M., Ono, C.J., Martinez-Rossi, N.M., and Rossi, A. 2009. A splice variant of the Neurospora crassa hex-1 transcript, which encodes the major protein of the Woronin body, is modulated by extracellular phosphate and pH changes. FEBS Lett. 583:180-184.

  108. Lee, B., Yoshida, Y., and Hasunuma, K. 2009. Nucleoside diphosphate kinase-1 regulates hyphal development via the transcriptional regulation of catalase in Neurospora crassa. FEBS Lett. 583:3291-3295.

  109. Lee, D.W., Freitag, M., Selker, E.U., and Aramayo, R. 2008. A cytosine methyltransferase homologue is essential for sexual development in Aspergillus nidulans. PLoS One 3:e2531.

  110. Lee, H.C., Chang, S.S., Choudhary, S., Aalto, A.P., Maiti, M., Bamford, D.H., and Liu, Y. 2009. qiRNA is a new type of small interfering RNA induced by DNA damage. Nature 459:274-U163.

  111. Lew, R.R., and Kapishon, V. 2009. Ptk2 contributes to osmoadaptation in the filamentous fungus Neurospora crassa. Fungal Genet. Biol. 46:949-955.

  112. Lew, R.R., and Nasserifar, S. 2009. Transient responses during hyperosmotic shock in the filamentous fungus Neurospora crassa. Microbiology 155:903-911.

  113. Lewis, Z.A., Honda, S., Khlafallah, T.K., Jeffress, J.K., Freitag, M., Mohn, F., Schubeler, D., and Selker, E.U. 2009. Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa. Genome Res. 19:427-437.

  114. Liu, N., Huang, Q.J., Hui, Z., Liang, Y.T., Yu, C.H., and Qu, L.H. 2009. Identification, expression and functional analysis of U3 snoRNA genes from Neurospora crassa. Prog. Nat. Sci. 19:167-172.

  115. Liu, N., Xiao, Z.D., Yu, C.H., Shao, P., Liang, Y.T., Guan, D.G., Yang, J.H., Chen, C.L., Qu, L.H., and Zhou, H. 2009. SnoRNAs from the filamentous fungus Neurospora crassa: structural, functional and evolutionary insights. BMC Genomics 10:515.

  116. Low. W. and G. Jedd. 2008. An improved plasmid for transformation of Neurospora crassa using the pan-2 gene as a selectable marker. Fungal Genet. Reports 55:44-45

  117. MacLean, D., Jones, J.D.G., and Studholme, D.J. 2009. Application of 'next-generation' sequencing technologies to microbial genetics. Nat. Rev. Microbiol. 7:287-296.

  118. Maddi, A., Bowman, S.M., and Free, S.J. 2009. Trifluoromethanesulfonic acid-based proteomic analysis of cell wall and secreted proteins of the ascomycetous fungi Neurospora crassa and Candida albicans. Fungal Genet. Biol. 46:768-781.

  119. Maerz, S., Dettmann, A., Ziv, C., Liu, Y., Valerius, O., Yarden, O., and Seiler, S. 2009. Two NDR kinase-MOB complexes function as distinct modules during septum formation and tip extension in Neurospora crassa. Mol. Microbiol. 74:707-723.

  120. Malik, H.S., and Henikoff, S. 2009. Major evolutionary transitions in centromere complexity. Cell 138:1067-1082.

  121. Mason, A.J., Moussaoui, W., Abdelrahman, T., Boukhari, A., Bertani, P., Marquette, A., Shooshtarizaheh, P., Moulay, G., Boehm, N., Guerold, B., Sawers, R.J.H., Kichler, A., Metz-Boutigue, M.-H., Candolfi, E., Prevost, G., and Bechinger, B. 2009. Structural determinants of antimicrobial and antiplasmodial activity and selectivity in histidine-rich amphipathic cationic peptides. J. Biol. Chem. 284:119-133.

  122. McCluskey, K. and Plamann, M. 2008. Perspectives on genetic resources at the Fungal Genetics Stock Center. Fungal Genet. Reports 55:15-17.

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