Nuclear genes
| Gene
|
Linkage
group
|
Reference
|
Genbank
|
Closest
autocalled gene |
| Calmodulin-binding
coiled-coil protein, homology to Nuf1/Spc110 and Pcp1p
|
{VI}
|
AF365926
|
AN3062.3
| |
| Chitin
deacetylase
|
{VIII}
|
|
EU785046
|
AN9830.3
|
| Chitin
deacetylase
|
{VIII}
|
|
EU785045
EF632068 |
AN1852.3
|
| Epoxide
hydrolase, Hyl1 family
|
{V}
|
BK001778
|
AN5262.3
| |
| Iso-orotate
decarboxylase
|
{VIII}
|
1069
|
|
AN0050.3
|
| Laccase homology
|
{IV}
|
1091
|
|
AN7389.3
|
| Laccase homology
|
{III}
|
1091
|
|
AN8581.3
|
| Lysophospholipase A
hydrolase, Hyl1 family
|
{IV}
|
AB193027
|
AN7792.3
| |
| Magmas-like
protein
|
{V}
|
1021
|
|
AN5693.3
|
| Ornithine
decarboxylase antizyme
|
{IV}
|
923
|
AF291577
|
AN7432.3
|
| Oxidorectase
|
{VII}
|
AF458074
|
AN1831.3
| |
| Pectinase,
endo-polygalacturonase
|
{III}
|
AF461051
|
AN4372.3
| |
| Pectinase,
exo-polygalacturonase
|
{VII}
|
AY237304
|
AN8891.3
| |
| Rhamnogalacturonase
|
{VI}
|
1215
|
DQ677631
|
AN9134.3
|
| S-adenosyl
methionine decarboxylase
|
{II}
|
924
|
AF153765
|
AN8231.3
|
| Thymine-7-hydroxylase
|
{VIII}
|
1069
|
|
AN0051.3
|
| Xyloglucanobiohydrolase
|
{VII}
|
1103
|
|
AN1542.3
|
| Gene
|
Reference
|
Genbank
|
| 5s,
5.8s rRNA (various strains)
|
AJ276063 AJ000933 AY924880 K03162 L76746 U03520 U03521 U93686 X00687 X00688 X00689 X03566 X03567 X03568 X62988 | |
| 5s
rRNA pseudogenes
|
955
|
X03569 X03565 |
| 18
and 28s ribosomal subunits & spacers, different wild strains
|
(multiple)
|
AB008403 AF078898 AF078899 AF109337 AF109338 AF453900 AF453899 AF453924 AF454117 AF454141 AF454192 AF454167 AF454168 AF455424 AF455499 AF455505 AJ557788 AJ557730 AY234998 AY234999 AY235000 AY235002 AY373888 AY452983 AY660918 AY660921 AY660924 L20939 L21921 U03520 U03521 U26873 U26876 U29851 U29856 U29859 U40122 U77377 U93686 X62988 X78539 Z27114 |
| Linkage
gp.
|
DNA
|
Reference
|
Genbank
|
| Cosmid
RL07H02 partial sequence
|
954
|
AF29690
| |
| VIII
|
Cosmid
SW06H01 overlaps SW06E08
|
-
|
AF188714
|
| VIII
|
Cosmid
SW30B01 includes spdA and facB
|
-
|
AC004395
|
| VIII
|
Cosmid
SW02H02 includes spdA and facB
|
-
|
AC005299
|
| Dane
elements from cosmids OW21D01 and OW06B11
|
954
|
AF295689 AF295688 | |
| Telomeric
clones
|
958
|
U95210 U95211 U95212 |
| Sequence
|
Reference
|
Genbank
|
| 16S
rRNA and trNA-tyr
|
938
|
V00653
|
| ATPase
subunit 9 (mitochondrial copy)
|
931
|
M35967
|
| Cytochrome
b (non-Glasgow strains)
|
940
|
AB000599 AB000598 AB000582 AB000581 AB000580 |
| Downstream
duplication, Asn-tRNA and URF-x
|
930
|
J01391
|
| HpaII-6
region, DNA fragments A-E
|
941
|
M32572 M32573 M32574 M32575 M32576 |
| L-rRNA
and tRNA-pro
|
927
|
X06961
|
| NADH-ubiquinone
oxidoreductase
|
927
|
QXAS4M
|
| Small
subunit rRNA
|
960
|
J01393
|
| tRNA-met
and tRNA-his
|
927
|
X07795
|
| tRNA-arg,
tRNA-asp, ATPase subunit 6
|
927,
959
|
X04161 X01507 |
| tRNAs,
LrRNA, ATPase subunit 6, cytochrome oxidase subunit 3, 7 URFs
|
939
|
J01390
|
| S-rRNA,
tRNA tyr and tRNA-lys, cytochrome oxidase subunit III
|
927
|
X06960
|
| Upstream
duplication Asn-tRNA and URF-A3
|
930
|
AH001256 J01392 |
| URF1
and URF4 (unidentified reading frames)
|
127
|
V04465
|
| URF3
and (unidentified reading frame)
|
928
|
X15442
|
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